Exome sequence genotype imputation in globally diverse hexaploid wheat accessions

Genotype Imputation with Millions of Reference Samples

(2016) Brian L. Browning et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Impact of genetic similarity on imputation accuracy

(2015) Nab Raj Roshyara et al.   BMC GENETICS

Prospects and limits of marker imputation in quantitative genetic studies in European elite wheat (Triticum aestivum L.)

(2015) Sang He et al.   BMC GENOMICS

Large-scale whole-genome sequencing of the Icelandic population

(2015) Daniel F Gudbjartsson et al.   NATURE GENETICS

LinkImpute: Fast and Accurate Genotype Imputation for Nonmodel Organisms

(2015) Daniel Money et al.   G3-Genes Genomes Genetics

A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes

(2015) Katherine W Jordan et al.   GENOME BIOLOGY

Evaluation of measures of correctness of genotype imputation in the context of genomic prediction: a review of livestock applications

(2014) M. P. L. Calus et al.   Animal

Consequences of splitting whole-genome sequencing effort over multiple breeds on imputation accuracy

(2014) Aniek C Bouwman et al.   BMC GENETICS

A new approach for efficient genotype imputation using information from relatives

(2014) Mehdi Sargolzaei et al.   BMC GENOMICS

Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle

(2014) Hans D Daetwyler et al.   NATURE GENETICS

Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array

(2014) Shichen Wang et al.   PLANT BIOTECHNOLOGY JOURNAL

Impact of Genotype Imputation on the Performance of GBLUP and Bayesian Methods for Genomic Prediction

(2014) Liuhong Chen et al.   PLoS One

A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome

(2014) et al.   SCIENCE

Structural and functional partitioning of bread wheat chromosome 3B

(2014) F. Choulet et al.   SCIENCE

Establishing the A. E. Watkins landrace cultivar collection as a resource for systematic gene discovery in bread wheat

(2014) Luzie U. Wingen et al.   THEORETICAL AND APPLIED GENETICS

Genetic Diversity Analysis of Highly Incomplete SNP Genotype Data with Imputations: An Empirical Assessment

(2014) Yong-Bi Fu   G3-Genes Genomes Genetics

Toward genomic prediction from whole-genome sequence data: impact of sequencing design on genotype imputation and accuracy of predictions

(2013) T Druet et al.   HEREDITY

Genome-wide comparative diversity uncovers multiple targets of selection for improvement in hexaploid wheat landraces and cultivars

(2013) C. R. Cavanagh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Imputation of Unordered Markers and the Impact on Genomic Selection Accuracy

(2013) Jessica E. Rutkoski et al.   G3-Genes Genomes Genetics

Factors Affecting the Accuracy of Genotype Imputation in Populations from Several Maize Breeding Programs

(2012) John M. Hickey et al.   CROP SCIENCE

Reliability of genomic prediction for German Holsteins using imputed genotypes from low-density chips

(2012) D. Segelke et al.   JOURNAL OF DAIRY SCIENCE

Quality of core collections for effective utilisation of genetic resources review, discussion and interpretation

(2012) T. L. Odong et al.   THEORETICAL AND APPLIED GENETICS

Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.)

(2011) Shiaoman Chao et al.   BMC GENOMICS

Imputation of Missing Genotypes From Sparse to High Density Using Long-Range Phasing

(2011) Hans D. Daetwyler et al.   GENETICS

Common SNPs explain a large proportion of the heritability for human height

(2010) Jian Yang et al.   NATURE GENETICS

Meta-analysis and imputation refines the association of 15q25 with smoking quantity

(2010) Jason Z Liu et al.   NATURE GENETICS

Genotype imputation for genome-wide association studies

(2010) Jonathan Marchini et al.   NATURE REVIEWS GENETICS

A Unified Approach to Genotype Imputation and Haplotype-Phase Inference for Large Data Sets of Trios and Unrelated Individuals

(2009) Brian L. Browning et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Meta-analysis in genome-wide association studies

(2009) Eleftheria Zeggini et al.   PHARMACOGENOMICS

Practical aspects of imputation-driven meta-analysis of genome-wide association studies

(2008) P. I.W. de Bakker et al.   HUMAN MOLECULAR GENETICS

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE

Meta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetes

(2008) Eleftheria Zeggini et al.   NATURE GENETICS