MicroRNA dynamics at the onset of primordial germ and somatic cell sex differentiation during mouse embryonic gonad development

MicroRNA-183-96-182 Cluster Regulates Bovine Granulosa Cell Proliferation and Cell Cycle Transition by Coordinately Targeting FOXO11

(2016) Samuel Gebremedhn et al.   BIOLOGY OF REPRODUCTION

Degradation dynamics of microRNAs revealed by a novel pulse-chase approach

(2016) Matteo J. Marzi et al.   GENOME RESEARCH

Targeted Disruption of miR-17-92 Impairs Mouse Spermatogenesis by Activating mTOR Signaling Pathway

(2016) Raoying Xie et al.   MEDICINE

miRNet - dissecting miRNA-target interactions and functional associations through network-based visual analysis

(2016) Yannan Fan et al.   NUCLEIC ACIDS RESEARCH

Spermatogenesis: The Commitment to Meiosis

(2016) Michael D. Griswold   PHYSIOLOGICAL REVIEWS

Evaluation of microRNA alignment techniques

(2016) Mark Ziemann et al.   RNA

Mechanisms of microRNA turnover

(2015) Maryam Sanei et al.   CURRENT OPINION IN PLANT BIOLOGY

Activin/Nodal signalling in stem cells

(2015) S. Pauklin et al.   DEVELOPMENT

Critical role of the miR-200 family in regulating differentiation and proliferation of neurons

(2015) Ankita Pandey et al.   JOURNAL OF NEUROCHEMISTRY

PGC-Enriched miRNAs Control Germ Cell Development

(2015)   MOLECULES AND CELLS

Towards a molecular understanding of microRNA-mediated gene silencing

(2015) Stefanie Jonas et al.   NATURE REVIEWS GENETICS

Characterization of the mammalian miRNA turnover landscape

(2015) Yanwen Guo et al.   NUCLEIC ACIDS RESEARCH

Diversity and functional convergence of small noncoding RNAs in male germ cell differentiation and fertilization

(2015) Jesús García-López et al.   RNA

Activin A Accelerates the Progression of Fetal Oocytes Throughout Meiosis and Early Oogenesis in the Mouse

(2015) Gui-Jin Liang et al.   STEM CELLS AND DEVELOPMENT

miRNA–target chimeras reveal miRNA 3′-end pairing as a major determinant of Argonaute target specificity

(2015) Michael J. Moore et al.   Nature Communications

Predicting effective microRNA target sites in mammalian mRNAs

(2015) Vikram Agarwal et al.   eLife

Uridylation by TUT4 and TUT7 Marks mRNA for Degradation

(2014) Jaechul Lim et al.   CELL

DIANA-TarBase v7.0: indexing more than half a million experimentally supported miRNA:mRNA interactions

(2014) Ioannis S. Vlachos et al.   NUCLEIC ACIDS RESEARCH

Selective microRNA uridylation by Zcchc6 (TUT7) and Zcchc11 (TUT4)

(2014) James E. Thornton et al.   NUCLEIC ACIDS RESEARCH

Gene Ontology Consortium: going forward

(2014)   NUCLEIC ACIDS RESEARCH

Embryonic stem cell-specific microRNAs contribute to pluripotency by inhibiting regulators of multiple differentiation pathways

(2014) Andreas J. Gruber et al.   NUCLEIC ACIDS RESEARCH

MicroRNAs-140-5p/140-3p Modulate Leydig Cell Numbers in the Developing Mouse Testis

(2013) J. Rakoczy et al.   BIOLOGY OF REPRODUCTION

SOX9 Regulates MicroRNA miR-202-5p/3p Expression During Mouse Testis Differentiation1

(2013) Elanor N. Wainwright et al.   BIOLOGY OF REPRODUCTION

The miR-183/96/182 Cluster Regulates Oxidative Apoptosis and Sensitizes Cells to Chemotherapy in Gliomas

(2013) Hailin Tang et al.   CURRENT CANCER DRUG TARGETS

Homeoproteins Six1 and Six4 Regulate Male Sex Determination and Mouse Gonadal Development

(2013) Yuka Fujimoto et al.   DEVELOPMENTAL CELL

Control of mammalian germ cell entry into meiosis

(2013) Chun-Wei Feng et al.   MOLECULAR AND CELLULAR ENDOCRINOLOGY

Polycomb recruitment attenuates retinoic acid–induced transcription of the bivalent NR2F1 gene

(2013) Kristian B. Laursen et al.   NUCLEIC ACIDS RESEARCH

Reprogramming of microRNAs by adenosine-to-inosine editing and the selective elimination of edited microRNA precursors in mouse oocytes and preimplantation embryos

(2013) Jesús García-López et al.   NUCLEIC ACIDS RESEARCH

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

Transcription Factor TFAP2C Regulates Major Programs Required for Murine Fetal Germ Cell Maintenance and Haploinsufficiency Predisposes to Teratomas in Male Mice

(2013) Jana Schemmer et al.   PLoS One

MicroRNAs in regulation of pluripotency and somatic cell reprogramming

(2013) Tian Wang et al.   RNA Biology

Expression dynamics of microRNA biogenesis during preimplantation mouse development

(2012) Jesús García-López et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

AGO4 Regulates Entry into Meiosis and Influences Silencing of Sex Chromosomes in the Male Mouse Germline

(2012) Andrew J. Modzelewski et al.   DEVELOPMENTAL CELL

Flexible and Versatile as a Chameleon—Sophisticated Functions of microRNA-199a

(2012) Shen Gu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Basic Helix-Loop-Helix Transcription Factor Twist1 Inhibits Transactivator Function of Master Chondrogenic Regulator Sox9

(2012) Shoujun Gu et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Tet1 controls meiosis by regulating meiotic gene expression

(2012) Shinpei Yamaguchi et al.   NATURE

Expression determinants of mammalian argonaute proteins in mediating gene silencing

(2012) Paul N. Valdmanis et al.   NUCLEIC ACIDS RESEARCH

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

(2012) Guangchuang Yu et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

CTNNB1 Signaling in Sertoli Cells Downregulates Spermatogonial Stem Cell Activity via WNT4

(2012) Alexandre Boyer et al.   PLoS One

p53-Facilitated miR-199a-3p Regulates Somatic Cell Reprogramming

(2012) Jiaxu Wang et al.   STEM CELLS

IsomiRs – the overlooked repertoire in the dynamic microRNAome

(2012) Corine T. Neilsen et al.   TRENDS IN GENETICS

RNA-based regulation of pluripotency

(2012) Jane E. Wright et al.   TRENDS IN GENETICS

Primordial Germ Cells in Mice

(2012) M. Saitou et al.   Cold Spring Harbor Perspectives in Biology

Specific miRNA Stabilization by Gld2-Catalyzed Monoadenylation

(2012) Andrea D’Ambrogio et al.   Cell Reports

Temporal Transcriptional Profiling of Somatic and Germ Cells Reveals Biased Lineage Priming of Sexual Fate in the Fetal Mouse Gonad

(2012) Samantha A. Jameson et al.   PLoS Genetics

Two miRNA Clusters, Mir-17-92 (Mirc1) and Mir-106b-25 (Mirc3), Are Involved in the Regulation of Spermatogonial Differentiation in Mice1

(2011) Ming-Han Tong et al.   BIOLOGY OF REPRODUCTION

VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R

(2011) Hanbo Chen et al.   BMC BIOINFORMATICS

Hormonal Regulation of Sertoli Cell Micro-RNAs at Spermiation

(2011) Peter K. Nicholls et al.   ENDOCRINOLOGY

Post-transcriptional generation of miRNA variants by multiple nucleotidyl transferases contributes to miRNA transcriptome complexity

(2011) S. K. Wyman et al.   GENOME RESEARCH

Non-coding RNAs as regulators of embryogenesis

(2011) Andrea Pauli et al.   NATURE REVIEWS GENETICS

Mir-290-295 deficiency in mice results in partially penetrant embryonic lethality and germ cell defects

(2011) L. A. Medeiros et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Naive and primed murine pluripotent stem cells have distinct miRNA expression profiles

(2011) A. Jouneau et al.   RNA

MicroRNAs and their isomiRs function cooperatively to target common biological pathways

(2011) Nicole Cloonan et al.   GENOME BIOLOGY

Sry: the master switch in mammalian sex determination

(2010) K. Kashimada et al.   DEVELOPMENT

FGF9 Suppresses Meiosis and Promotes Male Germ Cell Fate in Mice

(2010) Josephine Bowles et al.   DEVELOPMENTAL CELL

The miR-290-295 cluster promotes pluripotency maintenance by regulating cell cycle phase distribution in mouse embryonic stem cells

(2010) Zsuzsanna Lichner et al.   DIFFERENTIATION

Gene Expression Profiling Reveals Cyp26b1 to Be an Activin Regulated Gene Involved in Ovarian Granulosa Cell Proliferation

(2010) Jingjing L. Kipp et al.   ENDOCRINOLOGY

A comprehensive survey of 3' animal miRNA modification events and a possible role for 3' adenylation in modulating miRNA targeting effectiveness

(2010) A. M. Burroughs et al.   GENOME RESEARCH

Differential regulation of microRNA stability

(2010) S. Bail et al.   RNA

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

The pluripotency factor LIN28 marks undifferentiated spermatogonia in mouse

(2009) Ke Zheng et al.   BMC DEVELOPMENTAL BIOLOGY

A Signaling Principle for the Specification of the Germ Cell Lineage in Mice

(2009) Yasuhide Ohinata et al.   CELL

MicroRNAs: Target Recognition and Regulatory Functions

(2009) David P. Bartel   CELL

Down-regulation of miR-17 family expression in response to retinoic acid induced neuronal differentiation

(2009) Natalie J. Beveridge et al.   CELLULAR SIGNALLING

Selective stabilization of mammalian microRNAs by 3' adenylation mediated by the cytoplasmic poly(A) polymerase GLD-2

(2009) T. Katoh et al.   GENES & DEVELOPMENT

Dicer is required for Sertoli cell function and survival

(2009) Gwang-Jin Kim et al.   INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY

MicroRNA-125b Promotes Neuronal Differentiation in Human Cells by Repressing Multiple Targets

(2009) M. T. N. Le et al.   MOLECULAR AND CELLULAR BIOLOGY

Mir-214-Dependent Regulation of the Polycomb Protein Ezh2 in Skeletal Muscle and Embryonic Stem Cells

(2009) Aster H. Juan et al.   MOLECULAR CELL

Regulation of Stem Cell Pluripotency and Differentiation Involves a Mutual Regulatory Circuit of the Nanog, OCT4, and SOX2 Pluripotency Transcription Factors With Polycomb Repressive Complexes and Stem Cell microRNAs

(2009) Vasundhra Kashyap et al.   STEM CELLS AND DEVELOPMENT

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

The expression patterns of genes involved in the RNAi pathways are tissue-dependent and differ in the germ and somatic cells of mouse testis

(2008) E GONZALEZGONZALEZ et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Connecting microRNA Genes to the Core Transcriptional Regulatory Circuitry of Embryonic Stem Cells

(2008) Alexander Marson et al.   CELL

Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells

(2008) R. D. Morin et al.   GENOME RESEARCH

Sex-specific roles of  -catenin in mouse gonadal development

(2008) C.-F. Liu et al.   HUMAN MOLECULAR GENETICS

Human SRY inhibits β-catenin-mediated transcription

(2008) Pascal Bernard et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

The miR-200 Family Inhibits Epithelial-Mesenchymal Transition and Cancer Cell Migration by Direct Targeting of E-cadherin Transcriptional RepressorsZEB1andZEB2

(2008) Manav Korpal et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Lin28 Mediates the Terminal Uridylation of let-7 Precursor MicroRNA

(2008) Inha Heo et al.   MOLECULAR CELL

Deletion of Dicer in Somatic Cells of the Female Reproductive Tract Causes Sterility

(2008) Ankur K. Nagaraja et al.   MOLECULAR ENDOCRINOLOGY

MicroRNA Biogenesis Is Required for Mouse Primordial Germ Cell Development and Spermatogenesis

(2008) Katsuhiko Hayashi et al.   PLoS One

MicroRNA (miRNA) cloning analysis reveals sex differences in miRNA expression profiles between adult mouse testis and ovary

(2008) Takuya Mishima et al.   REPRODUCTION

Sex determination and SRY: down to a wink and a nudge?

(2008) Ryohei Sekido et al.   TRENDS IN GENETICS

Dynamic Regulation of Mitotic Arrest in Fetal Male Germ Cells

(2007) Patrick S. Western et al.   STEM CELLS