Three-dimensional structure of the 3′X-tail of hepatitis C virus RNA in monomeric and dimeric states

FoXS, FoXSDock and MultiFoXS: Single-state and multi-state structural modeling of proteins and their complexes based on SAXS profiles

(2016) Dina Schneidman-Duhovny et al.   NUCLEIC ACIDS RESEARCH

Deciphering conformational transitions of proteins by small angle X-ray scattering and normal mode analysis

(2016) Alejandro Panjkovich et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Identification of novel RNA secondary structures within the hepatitis C virus genome reveals a cooperative involvement in genome packaging

(2016) H. Stewart et al.   Scientific Reports

Involvement of the 3’ Untranslated Region in Encapsidation of the Hepatitis C Virus

(2016) Guoli Shi et al.   PLoS Pathogens

HIV-1 and M-PMV RNA Nuclear Export Elements Program Viral Genomes for Distinct Cytoplasmic Trafficking Behaviors

(2016) Ginger M. Pocock et al.   PLoS Pathogens

Mutations of the SL2 dimerization sequence of the hepatitis C genome abrogate viral replication

(2015) Cyril Masante et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Small-angle X-ray scattering: a bridge between RNA secondary structures and three-dimensional topological structures

(2015) Xianyang Fang et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

The conserved 3′X terminal domain of hepatitis C virus genomic RNA forms a two-stem structure that promotes viral RNA dimerization

(2015) Ángel Cantero-Camacho et al.   NUCLEIC ACIDS RESEARCH

Inhibition of HCV translation by disrupting the structure and interactions of the viral CRE and 3′ X-tail

(2015) Andrew Tuplin et al.   NUCLEIC ACIDS RESEARCH

Accurate assessment of mass, models and resolution by small-angle scattering

(2013) Robert P. Rambo et al.   NATURE

End-to-end crosstalk within the hepatitis C virus genome mediates the conformational switch of the 3′X-tail region

(2013) Cristina Romero-López et al.   NUCLEIC ACIDS RESEARCH

Direct evidence for RNA-RNA interactions at the 3' end of the Hepatitis C virus genome using surface plasmon resonance

(2013) W. Palau et al.   RNA

New developments in theATSASprogram package for small-angle scattering data analysis

(2012) Maxim V. Petoukhov et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Hepatitis C virus RNA: molecular switches mediated by long-range RNA–RNA interactions?

(2012) Sumangala Shetty et al.   NUCLEIC ACIDS RESEARCH

A twist in the tail: SHAPE mapping of long-range interactions and structural rearrangements of RNA elements involved in HCV replication

(2012) Andrew Tuplin et al.   NUCLEIC ACIDS RESEARCH

RNA Structural Elements of Hepatitis C Virus Controlling Viral RNA Translation and the Implications for Viral Pathogenesis

(2012) David Piñeiro et al.   Viruses-Basel

Characterizing flexible and intrinsically unstructured biological macromolecules by SAS using the Porod-Debye law

(2011) Robert P. Rambo et al.   BIOPOLYMERS

FoXS: a web server for rapid computation and fitting of SAXS profiles

(2010) D. Schneidman-Duhovny et al.   NUCLEIC ACIDS RESEARCH

Hepatitis C virus genomic RNA dimerization is mediated via a kissing complex intermediate

(2010) S. Shetty et al.   RNA

Retroviral RNA Dimerization and Packaging: The What, How, When, Where, and Why

(2010) Silas F. Johnson et al.   PLoS Pathogens

RNA Polymerase Activity and Specific RNA Structure Are Required for Efficient HCV Replication in Cultured Cells

(2010) Asako Murayama et al.   PLoS Pathogens

Structure and flexibility within proteins as identified through small angle X-ray scattering

(2009) M. Pelikan et al.   GENERAL PHYSIOLOGY AND BIOPHYSICS

Determination of the molecular weight of proteins in solution from a single small-angle X-ray scattering measurement on a relative scale

(2009) H. Fischer et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

The Ligand-Free State of the TPP Riboswitch: A Partially Folded RNA Structure

(2009) Mona Ali et al.   JOURNAL OF MOLECULAR BIOLOGY

A long-range RNA-RNA interaction between the 5' and 3' ends of the HCV genome

(2009) C. Romero-Lopez et al.   RNA

A Hepatitis C Virus cis-Acting Replication Element Forms a Long-Range RNA-RNA Interaction with Upstream RNA Sequences in NS5B

(2008) S. Diviney et al.   JOURNAL OF VIROLOGY

The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data

(2008) Marc Parisien et al.   NATURE

The Complete VS Ribozyme in Solution Studied by Small-Angle X-Ray Scattering

(2008) Jan Lipfert et al.   STRUCTURE

Structure and function of HCV IRES domains

(2008) Peter J. Lukavsky   VIRUS RESEARCH