Uncovering the abilities ofAgaricus bisporusto degrade plant biomass throughout its life cycle

Temporal Alterations in the Secretome of the Selective Ligninolytic Fungus Ceriporiopsis subvermispora during Growth on Aspen Wood Reveal This Organism's Strategy for Degrading Lignocellulose

(2014) Chiaki Hori et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

An improved and reproducible protocol for the extraction of high quality fungal RNA from plant biomass substrates

(2014) Aleksandrina Patyshakuliyeva et al.   FUNGAL GENETICS AND BIOLOGY

ProteomeXchange provides globally coordinated proteomics data submission and dissemination

(2014) Juan A Vizcaíno et al.   NATURE BIOTECHNOLOGY

The InterPro protein families database: the classification resource after 15 years

(2014) Alex Mitchell et al.   NUCLEIC ACIDS RESEARCH

Carbohydrate utilization and metabolism is highly differentiated in Agaricus bisporus

(2013) Aleksandrina Patyshakuliyeva et al.   BMC GENOMICS

Carbohydrate composition of compost during composting and mycelium growth of Agaricus bisporus

(2013) Edita Jurak et al.   CARBOHYDRATE POLYMERS

A comparative genomic analysis of the oxidative enzymes potentially involved in lignin degradation by Agaricus bisporus

(2013) Harshavardhan Doddapaneni et al.   FUNGAL GENETICS AND BIOLOGY

Agaricus bisporus and related Agaricus species on lignocellulose: Production of manganese peroxidase and multicopper oxidases

(2013) Kristiina Hildén et al.   FUNGAL GENETICS AND BIOLOGY

The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

Enzymatic oxalic acid regulation correlated with wood degradation in four brown-rot fungi

(2012) Anne Christine Steenkjær Hastrup et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Cyber-T web server: differential analysis of high-throughput data

(2012) M. A. Kayala et al.   NUCLEIC ACIDS RESEARCH

Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche

(2012) E. Morin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis

(2012) E. Fernandez-Fueyo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

(2012) D. Floudas et al.   SCIENCE

Time-Dependent Profiles of Transcripts Encoding Lignocellulose-Modifying Enzymes of the White Rot Fungus Phanerochaete carnosa Grown on Multiple Wood Substrates

(2011) Jacqueline MacDonald et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Non-enzymatic depolymerization of cotton cellulose by fungal mimicking metabolites

(2011) Anne Christine Steenkjær Hastrup et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Protein Expression Regulation under Oxidative Stress

(2011) Christine Vogel et al.   MOLECULAR & CELLULAR PROTEOMICS

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus)

(2010) J. E. Stajich et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS

Delayed Correlation of mRNA and Protein Expression in Rapamycin-treated Cells and a Role for Ggc1 in Cellular Sensitivity to Rapamycin

(2009) Marjorie L. Fournier et al.   MOLECULAR & CELLULAR PROTEOMICS

Proteomic and Metabolomic Analyses of the White-Rot FungusPhanerochaete chrysosporiumExposed to Exogenous Benzoic Acid

(2008) Fumiko Matsuzaki et al.   JOURNAL OF PROTEOME RESEARCH

The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis

(2008) F. Martin et al.   NATURE

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS