An RNA structure-mediated, posttranscriptional model of human α-1-antitrypsin expression
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Title
An RNA structure-mediated, posttranscriptional model of human α-1-antitrypsin expression
Authors
Keywords
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Journal
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Volume 114, Issue 47, Pages E10244-E10253
Publisher
Proceedings of the National Academy of Sciences
Online
2017-11-07
DOI
10.1073/pnas.1706539114
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Note: Only part of the references are listed.- RNA Duplex Map in Living Cells Reveals Higher-Order Transcriptome Structure
- (2016) Zhipeng Lu et al. CELL
- Translation Regulation of the Glutamyl-prolyl-tRNA Synthetase GeneEPRSthrough Bypass of Upstream Open Reading Frames with Noncanonical Initiation Codons
- (2016) Sara K. Young et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Translation efficiency of mRNAs is increased by antisense oligonucleotides targeting upstream open reading frames
- (2016) Xue-hai Liang et al. NATURE BIOTECHNOLOGY
- Direct identification of base-paired RNA nucleotides by correlated chemical probing
- (2016) Andrey Krokhotin et al. RNA
- In-depth analysis ofcis-determinants that either promote or inhibit reinitiation onGCN4mRNA after translation of its four short uORFs
- (2016) Stanislava Gunišová et al. RNA
- RNA secondary structure prediction based on SHAPE data in helix regions
- (2015) Mohadeseh Lotfi et al. JOURNAL OF THEORETICAL BIOLOGY
- Alternative transcripts of the SERPINA1 gene in alpha-1 antitrypsin deficiency
- (2015) Nerea Matamala et al. Journal of Translational Medicine
- Detecting riboSNitches with RNA folding algorithms: a genome-wide benchmark
- (2015) Meredith Corley et al. NUCLEIC ACIDS RESEARCH
- RPFdb: a database for genome wide information of translated mRNA generated from ribosome profiling
- (2015) Shang-Qian Xie et al. NUCLEIC ACIDS RESEARCH
- Increased Transcript Complexity in Genes Associated with Chronic Obstructive Pulmonary Disease
- (2015) Lela Lackey et al. PLoS One
- Multiple conformations are a conserved and regulatory feature of theRB15′ UTR
- (2015) Katrina M. Kutchko et al. RNA
- The potential of the riboSNitch in personalized medicine
- (2015) Amanda C. Solem et al. Wiley Interdisciplinary Reviews-RNA
- Widespread intron retention in mammals functionally tunes transcriptomes
- (2014) Ulrich Braunschweig et al. GENOME RESEARCH
- mRNA Destabilization Is the Dominant Effect of Mammalian MicroRNAs by the Time Substantial Repression Ensues
- (2014) Stephen W. Eichhorn et al. MOLECULAR CELL
- Quantitative analysis of mammalian translation initiation sites by FACS-seq
- (2014) W. L. Noderer et al. Molecular Systems Biology
- A draft map of the human proteome
- (2014) Min-Sik Kim et al. NATURE
- Sailfish enables alignment-free isoform quantification from RNA-seq reads using lightweight algorithms
- (2014) Rob Patro et al. NATURE BIOTECHNOLOGY
- RNA motif discovery by SHAPE and mutational profiling (SHAPE-MaP)
- (2014) Nathan A Siegfried et al. NATURE METHODS
- Identification and characterisation of eight novel SERPINA1 Null mutations
- (2014) Ilaria Ferrarotti et al. Orphanet Journal of Rare Diseases
- Statistical Analysis of SHAPE-Directed RNA Secondary Structure Modeling
- (2013) Srinivas Ramachandran et al. BIOCHEMISTRY
- Introduction to the 50th Anniversary of the Description of Alpha-1 Antitrypsin Deficiency
- (2013) Robert A. Sandhaus et al. COPD-Journal of Chronic Obstructive Pulmonary Disease
- In vivo genome-wide profiling of RNA secondary structure reveals novel regulatory features
- (2013) Yiliang Ding et al. NATURE
- Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo
- (2013) Silvi Rouskin et al. NATURE
- Accurate SHAPE-directed RNA secondary structure modeling, including pseudoknots
- (2013) C. E. Hajdin et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Tuning gene expression with synthetic upstream open reading frames
- (2013) J. P. Ferreira et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Causes and Effects of N-Terminal Codon Bias in Bacterial Genes
- (2013) D. B. Goodman et al. SCIENCE
- Before It Gets Started: Regulating Translation at the 5′ UTR
- (2012) Patricia R. Araujo et al. COMPARATIVE AND FUNCTIONAL GENOMICS
- Genome-wide Measurement of RNA Folding Energies
- (2012) Yue Wan et al. MOLECULAR CELL
- Global or local? Predicting secondary structure and accessibility in mRNAs
- (2012) Sita J. Lange et al. NUCLEIC ACIDS RESEARCH
- ViennaRNA Package 2.0
- (2011) Ronny Lorenz et al. Algorithms for Molecular Biology
- SHAPE-directed RNA secondary structure prediction
- (2010) Justin T. Low et al. METHODS
- Defining the transcriptome and proteome in three functionally different human cell lines
- (2010) Emma Lundberg et al. Molecular Systems Biology
- A Universal Trend of Reduced mRNA Stability near the Translation-Initiation Site in Prokaryotes and Eukaryotes
- (2010) Wanjun Gu et al. PLoS Computational Biology
- Correlation of mRNA and protein in complex biological samples
- (2009) Tobias Maier et al. FEBS LETTERS
- The COPD genetic association compendium: a comprehensive online database of COPD genetic associations
- (2009) Peter J. Castaldi et al. HUMAN MOLECULAR GENETICS
- UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs
- (2009) Giorgio Grillo et al. NUCLEIC ACIDS RESEARCH
- Upstream open reading frames cause widespread reduction of protein expression and are polymorphic among humans
- (2009) S. E. Calvo et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Coding-Sequence Determinants of Gene Expression in Escherichia coli
- (2009) G. Kudla et al. SCIENCE
- Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling
- (2009) N. T. Ingolia et al. SCIENCE
- A Genome-Wide Association Study in Chronic Obstructive Pulmonary Disease (COPD): Identification of Two Major Susceptibility Loci
- (2009) Sreekumar G. Pillai et al. PLoS Genetics
- SERPINA1 Gene Variants in Individuals from the General Population with Reduced 1-Antitrypsin Concentrations
- (2008) M. Zorzetto et al. CLINICAL CHEMISTRY
- Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing
- (2008) Qun Pan et al. NATURE GENETICS
- Hereditary alpha-1-antitrypsin deficiency and its clinical consequences
- (2008) Laura Fregonese et al. Orphanet Journal of Rare Diseases
- A Translation Initiation Element Specific to mRNAs with Very Short 5′UTR that Also Regulates Transcription
- (2008) Rofa Elfakess et al. PLoS One
- Accurate SHAPE-directed RNA structure determination
- (2008) K. E. Deigan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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