Integration of Shh and Fgf signaling in controllingHoxgene expression in cultured limb cells

A role for HOX13 proteins in the regulatory switch between TADs at theHoxDlocus

(2016) Leonardo Beccari et al.   GENES & DEVELOPMENT

deepTools2: a next generation web server for deep-sequencing data analysis

(2016) Fidel Ramírez et al.   NUCLEIC ACIDS RESEARCH

Key pathways regulated by HoxA9,10,11/HoxD9,10,11 during limb development

(2015) Anna M. Raines et al.   BMC DEVELOPMENTAL BIOLOGY

Spatiotemporal regulation of GLI target genes in the mammalian limb bud

(2015) Jordan P. Lewandowski et al.   DEVELOPMENTAL BIOLOGY

AHoxa13:Cre mouse strain for conditional gene manipulation in developing limb, hindgut, and urogenital system

(2015) Martina Scotti et al.   GENESIS

SnapShot: Hox Gene Regulation

(2014) Guillaume Andrey et al.   CELL

deepTools: a flexible platform for exploring deep-sequencing data

(2014) Fidel Ramírez et al.   NUCLEIC ACIDS RESEARCH

HTSstation: A Web Application and Open-Access Libraries for High-Throughput Sequencing Data Analysis

(2014) Fabrice P. A. David et al.   PLoS One

The Hierarchy of the 3D Genome

(2013) Johan H. Gibcus et al.   MOLECULAR CELL

A Switch Between Topological Domains Underlies HoxD Genes Collinearity in Mouse Limbs

(2013) G. Andrey et al.   SCIENCE

A decade of 3C technologies: insights into nuclear organization

(2012) E. de Wit et al.   GENES & DEVELOPMENT

A Regulatory Archipelago Controls Hox Genes Transcription in Digits

(2011) Thomas Montavon et al.   CELL

Identification of spontaneous mutations within the long-range limb-specific Sonic hedgehog enhancer (ZRS) that alter Sonic hedgehog expression in the chicken limb mutants oligozeugodactyly and silkie breed

(2011) Sarah A. Maas et al.   DEVELOPMENTAL DYNAMICS

Initiation of Proximal-Distal Patterning in the Vertebrate Limb by Signals and Growth

(2011) K. L. Cooper et al.   SCIENCE

Dynamic Assignment and Maintenance of Positional Identity in the Ventral Neural Tube by the Morphogen Sonic Hedgehog

(2010) Eric Dessaud et al.   PLOS BIOLOGY

Wnt and FGF signals interact to coordinate growth with cell fate specification during limb development

(2008) D. ten Berge et al.   DEVELOPMENT

Uncoupling Sonic Hedgehog Control of Pattern and Expansion of the Developing Limb Bud

(2008) Jianjian Zhu et al.   DEVELOPMENTAL CELL

A genome-scale analysis of the cis-regulatory circuitry underlying sonic hedgehog-mediated patterning of the mammalian limb

(2008) S. A. Vokes et al.   GENES & DEVELOPMENT

Modeling Hox gene regulation in digits: reverse collinearity and the molecular origin of thumbness

(2008) T. Montavon et al.   GENES & DEVELOPMENT

Integration of growth and specification in chick wing digit-patterning

(2008) Matthew Towers et al.   NATURE