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A Bacterial Analysis Platform: An Integrated System for Analysing Bacterial Whole Genome Sequencing Data for Clinical Diagnostics and Surveillance

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Characterization of the bacterial gut microbiota of piglets suffering from new neonatal porcine diarrhoea

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Genetic relatedness of commensalEscherichia colifrom nursery pigs in intensive pig production in Denmark and molecular characterization of genetically different strains

(2015) A. Herrero-Fresno et al.   JOURNAL OF APPLIED MICROBIOLOGY

Sorbitol non-fermenting shiga toxin-producing Escherichia coli in cattle on smallholdings

(2014) M. Z. ISLAM et al.   EPIDEMIOLOGY AND INFECTION

Antibiotics and the gut microbiota

(2014) Sheetal R. Modi et al.   JOURNAL OF CLINICAL INVESTIGATION

Shiga-Toxin Genes and Genetic Diversity ofEscherichia coliIsolated from Pasteurized Cow Milk in Brazil

(2014) Simone Aparecida Hoffmann et al.   JOURNAL OF FOOD SCIENCE

The Role of the st313-td Gene in Virulence of Salmonella Typhimurium ST313

(2014) Ana Herrero-Fresno et al.   PLoS One

Solving the Problem of Comparing Whole Bacterial Genomes across Different Sequencing Platforms

(2014) Rolf S. Kaas et al.   PLoS One

Prevalence of Diarrhea-Associated Virulence Genes and Genetic Diversity in Escherichia coli Isolates from Fecal Material of Various Animal Hosts

(2013) Abhirosh Chandran et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Restrictions on antimicrobial use in food animal production: an international regulatory and economic survey

(2013) Dina Maron et al.   Globalization and Health

Multilocus Sequence Typing of Total-Genome-Sequenced Bacteria

(2012) M. V. Larsen et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Dutch patients, retail chicken meat and poultry share the same ESBL genes, plasmids and strains

(2011) M.A. Leverstein-van Hall et al.   CLINICAL MICROBIOLOGY AND INFECTION

Emerging avian pathogenic Escherichia coli strains belonging to clonal groups O111:H4-D-ST2085 and O111:H4-D-ST117 with high virulence-gene content and zoonotic potential

(2011) Azucena Mora et al.   VETERINARY MICROBIOLOGY

The population genetics of commensal Escherichia coli

(2010) Olivier Tenaillon et al.   NATURE REVIEWS MICROBIOLOGY

Occurrence of antibiotic resistance and class 1, 2 and 3 integrons in Escherichia coli isolated from a densely populated estuary (Seine, France)

(2009) Emilie Laroche et al.   FEMS MICROBIOLOGY ECOLOGY

Genes Related to Long Polar Fimbriae of Pathogenic Escherichia coli Strains as Reliable Markers To Identify Virulent Isolates

(2009) A. G. Torres et al.   JOURNAL OF CLINICAL MICROBIOLOGY

A simple and fast method for determining colony forming units

(2008) S. Sieuwerts et al.   LETTERS IN APPLIED MICROBIOLOGY