Information-theoretic analysis of the directional influence between cellular processes

Detectability of Granger causality for subsampled continuous-time neurophysiological processes

(2017) Lionel Barnett et al.   JOURNAL OF NEUROSCIENCE METHODS

3off2: A network reconstruction algorithm based on 2-point and 3-point information statistics

(2016) Séverine Affeldt et al.   BMC BIOINFORMATICS

Thermodynamics of information

(2015) Juan M. R. Parrondo et al.   Nature Physics

Fluctuation Relations of Fitness and Information in Population Dynamics

(2015) Tetsuya J. Kobayashi et al.   PHYSICAL REVIEW LETTERS

Maxwell’s demon in biochemical signal transduction with feedback loop

(2015) Sosuke Ito et al.   Nature Communications

Noise-Driven Causal Inference in Biomolecular Networks

(2015) Robert J. Prill et al.   PLoS One

Stochastic thermodynamics of bipartite systems: transfer entropy inequalities and a Maxwell’s demon interpretation

(2014) D Hartich et al.   JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT

Stochasticity of metabolism and growth at the single-cell level

(2014) Daniel J. Kiviet et al.   NATURE

Second-law-like inequalities with information and their interpretations

(2014) Jordan M Horowitz et al.   NEW JOURNAL OF PHYSICS

Energy versus Information Based Estimations of Dissipation Using a Pair of Magnetic Colloidal Particles

(2014) S. Tusch et al.   PHYSICAL REVIEW LETTERS

Feedback cooling, measurement errors, and entropy production

(2013) T Munakata et al.   JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT

Measuring Information-Transfer Delays

(2013) Michael Wibral et al.   PLoS One

Identifying sources of variation and the flow of information in biochemical networks

(2012) C. G. Bowsher et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Differentiating information transfer and causal effect

(2010) J. T. Lizier et al.   EUROPEAN PHYSICAL JOURNAL B

Transfer entropy—a model-free measure of effective connectivity for the neurosciences

(2010) Raul Vicente et al.   JOURNAL OF COMPUTATIONAL NEUROSCIENCE

Protein Sectors: Evolutionary Units of Three-Dimensional Structure

(2009) Najeeb Halabi et al.   CELL

Thermodynamic efficiency of information and heat flow

(2009) Armen E Allahverdyan et al.   JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT

Mutual Information between Input and Output Trajectories of Biochemical Networks

(2009) Filipe Tostevin et al.   PHYSICAL REVIEW LETTERS

Information transfer in signaling pathways: A study using coupled simulated and experimental data

(2008) Jürgen Pahle et al.   BMC BIOINFORMATICS

Regulatory activity revealed by dynamic correlations in gene expression noise

(2008) Mary J Dunlop et al.   NATURE GENETICS