Comparative analysis between low- and high-cadmium-accumulating cultivars of Brassica parachinensis to identify difference of cadmium-induced microRNA and their targets

Comparative analysis of cadmium responsive microRNAs in roots of two Ipomoea aquatica Forsk. cultivars with different cadmium accumulation capacities

(2017) Chuang Shen et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Toxicity of cadmium and its health risks from leafy vegetable consumption

(2017) Yingying Huang et al.   Food & Function

Comparative Transcriptome Analysis between Low- and High-Cadmium-Accumulating Genotypes of Pakchoi (Brassica chinensis L.) in Response to Cadmium Stress

(2016) Qian Zhou et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Diverse roles of jasmonates and ethylene in abiotic stress tolerance

(2015) Kemal Kazan   TRENDS IN PLANT SCIENCE

Jerzy Jurka – 1950–2014

(2015) Prescott Deininger   Mobile DNA

Deep sequencing reveals important roles of microRNAs in response to drought and salinity stress in cotton

(2014) Fuliang Xie et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcriptome-Wide Characterization of Novel and Heat-Stress-Responsive microRNAs in Radish (Raphanus Sativus L.) Using Next-Generation Sequencing

(2014) Ronghua Wang et al.   PLANT MOLECULAR BIOLOGY REPORTER

Arabidopsis miR171-Targeted Scarecrow-Like Proteins Bind to GT cis-Elements and Mediate Gibberellin-Regulated Chlorophyll Biosynthesis under Light Conditions

(2014) Zhaoxue Ma et al.   PLoS Genetics

Over-expression of microRNA171 affects phase transitions and floral meristem determinancy in barley

(2013) Julien Curaba et al.   BMC PLANT BIOLOGY

Genome-wide identification and characterization of cadmium-responsive microRNAs and their target genes in radish (Raphanus sativus L.) roots

(2013) Liang Xu et al.   JOURNAL OF EXPERIMENTAL BOTANY

miR395 is involved in detoxification of cadmium in Brassica napus

(2013) Liu Wei Zhang et al.   JOURNAL OF HAZARDOUS MATERIALS

Overexpression of microRNA OsmiR397 improves rice yield by increasing grain size and promoting panicle branching

(2013) Yu-Chan Zhang et al.   NATURE BIOTECHNOLOGY

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

Current status on role of miRNAs during plant–fungus interaction

(2013) Om Prakash Gupta et al.   PHYSIOLOGICAL AND MOLECULAR PLANT PATHOLOGY

Identification of hot pepper cultivars containing low Cd levels after growing on contaminated soil: uptake and redistribution to the edible plant parts

(2013) Junliang Xin et al.   PLANT AND SOIL

Global identification of miRNAs and targets in Populus euphratica under salt stress

(2013) Bosheng Li et al.   PLANT MOLECULAR BIOLOGY

The Arabidopsis ETHYLENE RESPONSE FACTOR1 Regulates Abiotic Stress-Responsive Gene Expression by Binding to Different cis-Acting Elements in Response to Different Stress Signals

(2013) M.-C. Cheng et al.   PLANT PHYSIOLOGY

Identification and Comparative Analysis of Cadmium Tolerance-Associated miRNAs and Their Targets in Two Soybean Genotypes

(2013) Xiaolong Fang et al.   PLoS One

Comparisons in subcellular and biochemical behaviors of cadmium between low-Cd and high-Cd accumulation cultivars of pakchoi (Brassica chinensis L.)

(2013) Meng Xue et al.   Frontiers of Environmental Science & Engineering

Genome wide identification of chilling responsive microRNAs in Prunus persica

(2012) Abdelali Barakat et al.   BMC GENOMICS

SSR markers in transcripts of genes linked to post-transcriptional and transcriptional regulatory functions during vegetative and reproductive development of Elaeis guineensis

(2012) Timothy Tranbarger et al.   BMC PLANT BIOLOGY

microRNAs targeting DEAD-box helicases are involved in salinity stress response in rice (Oryza sativa L.)

(2012) Anca Macovei et al.   BMC PLANT BIOLOGY

Unravelling cadmium toxicity and tolerance in plants: Insight into regulatory mechanisms

(2012) Susana M. Gallego et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Molecular Identification and Analysis of Arsenite Stress-Responsive miRNAs in Rice

(2012) Qingpo Liu et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Genome-wide identification of Brassica napus microRNAs and their targets in response to cadmium

(2012) Zhao Sheng Zhou et al.   JOURNAL OF EXPERIMENTAL BOTANY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Rfam 11.0: 10 years of RNA families

(2012) Sarah W. Burge et al.   NUCLEIC ACIDS RESEARCH

High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis

(2011) N. W. Breakfield et al.   GENOME RESEARCH

Microarray-based analysis of cadmium-responsive microRNAs in rice (Oryza sativa)

(2011) Yanfei Ding et al.   JOURNAL OF EXPERIMENTAL BOTANY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Genome-wide identification of Medicago truncatula microRNAs and their targets reveals their differential regulation by heavy metal

(2011) ZHAO SHENG ZHOU et al.   PLANT CELL AND ENVIRONMENT

The role of sulfur assimilation and sulfur-containing compounds in trace element homeostasis in plants

(2010) GunNam Na et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Regulation of barley miRNAs upon dehydration stress correlated with target gene expression

(2010) Melda Kantar et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

A set of miRNAs from Brassica napus in response to sulphate deficiency and cadmium stress

(2010) Si Qi Huang et al.   PLANT BIOTECHNOLOGY JOURNAL

Arabidopsis Homologs of the Petunia HAIRY MERISTEM Gene Are Required for Maintenance of Shoot and Root Indeterminacy

(2010) E. M. Engstrom et al.   PLANT PHYSIOLOGY

Lignin and Biomass: A Negative Correlation for Wood Formation and Lignin Content in Trees

(2010) E. Novaes et al.   PLANT PHYSIOLOGY

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS

A first-generation microsatellite-based genetic linkage map of the Siberian jay (Perisoreus infaustus): insights into avian genome evolution

(2009) Sonja Jaari et al.   BMC GENOMICS

The structure, function, and biosynthesis of plant cell wall pectic polysaccharides

(2009) Kerry Hosmer Caffall et al.   CARBOHYDRATE RESEARCH

Origin, Biogenesis, and Activity of Plant MicroRNAs

(2009) Olivier Voinnet   CELL

Identification of Chinese cabbage genotypes with low cadmium accumulation for food safety

(2009) Weitao Liu et al.   ENVIRONMENTAL POLLUTION

Variation in Cadmium Accumulation among 30 Cultivars and Cadmium Subcellular Distribution in 2 Selected Cultivars of Water Spinach (Ipomoea aquatica Forsk.)

(2009) Junli Wang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Responses of different water spinach cultivars and their hybrid to Cd, Pb and Cd–Pb exposures

(2009) Junliang Xin et al.   JOURNAL OF HAZARDOUS MATERIALS

Leaf proteome responses of Arabidopsis thaliana exposed to mild cadmium stress

(2009) Brahim Semane et al.   JOURNAL OF PLANT PHYSIOLOGY

Quantitative genetic analysis of biomass and wood chemistry ofPopulusunder different nitrogen levels

(2009) Evandro Novaes et al.   NEW PHYTOLOGIST

Conserved microRNAs and their targets in model grass species Brachypodium distachyon

(2009) Turgay Unver et al.   PLANTA

Identification of conserved microRNAs and their target genes in tomato (Lycopersicon esculentum)

(2008) Zujun Yin et al.   GENE

MicroRNA-mediated Systemic Down-regulation of Copper Protein Expression in Response to Low Copper Availability inArabidopsis

(2008) Salah E. Abdel-Ghany et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Increase in Ascorbate-Glutathione Metabolism as Local and Precocious Systemic Responses Induced by Cadmium in Durum Wheat Plants

(2008) A. Paradiso et al.   PLANT AND CELL PHYSIOLOGY

Criteria for Annotation of Plant MicroRNAs

(2008) B. C. Meyers et al.   PLANT CELL

Cadmium-induced stress on the seed germination and seedling growth of Brassica napus L., and its alleviation through exogenous plant growth regulators

(2008) Huabing Meng et al.   PLANT GROWTH REGULATION

Selection and breeding of plant cultivars to minimize cadmium accumulation

(2007) C.A. Grant et al.   SCIENCE OF THE TOTAL ENVIRONMENT