Effect of lipid shape on toroidal pore formation and peptide orientation in lipid bilayers

Extending the Hydrophobic Mismatch Concept to Amphiphilic Membranolytic Peptides

(2016) Ariadna Grau-Campistany et al.   Journal of Physical Chemistry Letters

Membrane curvature modulation of protein activity determined by NMR

(2015) Richard M. Epand et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Computational Lipidomics with insane: A Versatile Tool for Generating Custom Membranes for Molecular Simulations

(2015) Tsjerk A. Wassenaar et al.   Journal of Chemical Theory and Computation

Investigating Hydrophilic Pores in Model Lipid Bilayers Using Molecular Simulations: Correlating Bilayer Properties with Pore-Formation Thermodynamics

(2015) Yuan Hu et al.   LANGMUIR

Hydrophobic mismatch demonstrated for membranolytic peptides and their use as molecular rulers to measure bilayer thickness in native cells

(2015) Ariadna Grau-Campistany et al.   Scientific Reports

19F NMR screening of unrelated antimicrobial peptides shows that membrane interactions are largely governed by lipids

(2014) Sergii Afonin et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Atomistic Simulations of Pore Formation and Closure in Lipid Bilayers

(2014) W. F. Drew Bennett et al.   BIOPHYSICAL JOURNAL

The SMART model: Soft Membranes Adapt and Respond, also Transiently, in the presence of antimicrobial peptides

(2014) Burkhard Bechinger   JOURNAL OF PEPTIDE SCIENCE

Synergistic Insertion of Antimicrobial Magainin-Family Peptides in Membranes Depends on the Lipid Spontaneous Curvature

(2013) Erik Strandberg et al.   BIOPHYSICAL JOURNAL

Melittin Creates Transient Pores in a Lipid Bilayer: Results from Computer Simulations

(2013) Kolattukudy P. Santo et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Membrane disordering is not sufficient for membrane permeabilization by islet amyloid polypeptide: studies of IAPP(20–29) fragments

(2013) Jeffrey R. Brender et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Lipid shape is a key factor for membrane interactions of amphipathic helical peptides

(2012) Erik Strandberg et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Self-Assembly of Lipids and Single-Walled Carbon Nanotubes: Effects of Lipid Structure and PEGylation

(2012) Hwankyu Lee et al.   Journal of Physical Chemistry C

Membrane Disruption and Early Events in the Aggregation of the Diabetes Related Peptide IAPP from a Molecular Perspective

(2011) Jeffrey R. Brender et al.   ACCOUNTS OF CHEMICAL RESEARCH

Spontaneous Buckling of Lipid Bilayer and Vesicle Budding Induced by Antimicrobial Peptide Magainin 2: A Coarse-Grained Simulation Study

(2011) Hyung-June Woo et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Bacterial membrane lipids in the action of antimicrobial agents

(2010) Richard M. Epand et al.   JOURNAL OF PEPTIDE SCIENCE

Antimicrobial Peptides Induce Growth of Phosphatidylglycerol Domains in a Model Bacterial Membrane

(2010) Anton A. Polyansky et al.   Journal of Physical Chemistry Letters

Solid-State NMR Analysis Comparing the Designer-Made Antibiotic MSI-103 with Its Parent Peptide PGLa in Lipid Bilayers†

(2008) Erik Strandberg et al.   BIOCHEMISTRY

Structure, membrane orientation, mechanism, and function of pexiganan — A highly potent antimicrobial peptide designed from magainin

(2008) Lindsey M. Gottler et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

The MARTINI Coarse-Grained Force Field: Extension to Proteins

(2008) Luca Monticelli et al.   Journal of Chemical Theory and Computation

GROMACS 4:  Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

(2008) Berk Hess et al.   Journal of Chemical Theory and Computation

Coarse-Grained Molecular Dynamics Studies of the Concentration and Size Dependence of Fifth- and Seventh-Generation PAMAM Dendrimers on Pore Formation in DMPC Bilayer

(2008) Hwankyu Lee et al.   JOURNAL OF PHYSICAL CHEMISTRY B

P-LINCS:  A Parallel Linear Constraint Solver for Molecular Simulation

(2007) Berk Hess   Journal of Chemical Theory and Computation