Significant variation between SNP-based HLA imputations in diverse populations: the last mile is the hardest

Human leucocyte antigen class I and II imputation in a multiracial population

(2016) M. H. Kuniholm et al.   International Journal of Immunogenetics

High-accuracy imputation for HLA class I and II genes based on high-resolution SNP data of population-specific references

(2015) S-S Khor et al.   PHARMACOGENOMICS JOURNAL

Performance of HLA allele prediction methods in African Americans for class II genes HLA-DRB1, −DQB1, and –DPB1

(2014) Albert M Levin et al.   BMC GENETICS

Predicting HLA genotypes using unphased and flanking single-nucleotide polymorphisms in Han Chinese population

(2014) Ai-Ru Hsieh et al.   BMC GENOMICS

Cost saving associated with implementing a stepwise approach to HLA typing of related donors before hematopoietic SCT

(2014) H Frangoul et al.   BONE MARROW TRANSPLANTATION

Predicting HLA alleles from high-resolution SNP data in three Southeast Asian populations

(2014) Nisha Esakimuthu Pillai et al.   HUMAN MOLECULAR GENETICS

Evaluation of HLA-DRB1 imputation using a Finnish dataset

(2014) E. Vlachopoulou et al.   TISSUE ANTIGENS

Association of Parkinson Disease with Structural and Regulatory Variants in the HLA Region

(2013) William T. Wissemann et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Genetic insights into common pathways and complex relationships among immune-mediated diseases

(2013) Miles Parkes et al.   NATURE REVIEWS GENETICS

The NHGRI GWAS Catalog, a curated resource of SNP-trait associations

(2013) Danielle Welter et al.   NUCLEIC ACIDS RESEARCH

HIBAG—HLA genotype imputation with attribute bagging

(2013) X Zheng et al.   PHARMACOGENOMICS JOURNAL

Imputing Amino Acid Polymorphisms in Human Leukocyte Antigens

(2013) Xiaoming Jia et al.   PLoS One

Common and well-documented HLA alleles: 2012 update to the CWD catalogue

(2013) S. J. Mack et al.   TISSUE ANTIGENS

Multi-Population Classical HLA Type Imputation

(2013) Alexander Dilthey et al.   PLoS Computational Biology

Interrogating the major histocompatibility complex with high-throughput genomics

(2012) P. I. W. de Bakker et al.   HUMAN MOLECULAR GENETICS

An integrated map of genetic variation from 1,092 human genomes

(2012)   NATURE

The IMGT/HLA database

(2012) James Robinson et al.   NUCLEIC ACIDS RESEARCH

HLA and pharmacogenetics of drug hypersensitivity

(2012) Rebecca Pavlos et al.   PHARMACOGENOMICS

HLA DNA typing: past, present, and future

(2012) H. Erlich   TISSUE ANTIGENS

New reservoirs of HLA alleles: pools of rare variants enhance immune defense

(2012) William Klitz et al.   TRENDS IN GENETICS

HLA*IMP—an integrated framework for imputing classical HLA alleles from SNP genotypes

(2011) Alexander T. Dilthey et al.   BIOINFORMATICS

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Empirical evaluations of analytical issues arising from predicting HLA alleles using multiple SNPs

(2011) Xinyi Zhang et al.   BMC GENETICS

Predicting multiallelic genes using unphased and flanking single nucleotide polymorphisms

(2011) Shuying S. Li et al.   GENETIC EPIDEMIOLOGY

HLA-A*3101 and Carbamazepine-Induced Hypersensitivity Reactions in Europeans

(2011) Mark McCormack et al.   NEW ENGLAND JOURNAL OF MEDICINE

Bioinformatics challenges for genome-wide association studies

(2010) J. H. Moore et al.   BIOINFORMATICS

Nomenclature for factors of the HLA system, 2010

(2010) S. G. E. Marsh et al.   TISSUE ANTIGENS

A Statistical Method for Predicting Classical HLA Alleles from SNP Data

(2008) Stephen Leslie et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Balancing selection and heterogeneity across the classical human leukocyte antigen loci: A meta-analytic review of 497 population studies

(2008) Owen D. Solberg et al.   HUMAN IMMUNOLOGY

Human MHC architecture and evolution: implications for disease association studies

(2008) J. A. Traherne   International Journal of Immunogenetics

Genome-wide association studies for complex traits: consensus, uncertainty and challenges

(2008) Mark I. McCarthy et al.   NATURE REVIEWS GENETICS

Defining the Role of the MHC in Autoimmunity: A Review and Pooled Analysis

(2008) Michelle M. A. Fernando et al.   PLoS Genetics