fusionDB: assessing microbial diversity and environmental preferences via functional similarity networks

From mesophilic to thermophilic digestion: the transitions of anaerobic bacterial, archaeal, and fungal community structures in sludge and manure samples

(2015) Weimin Sun et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The Pfam protein families database: towards a more sustainable future

(2015) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Functional Basis of Microorganism Classification

(2015) Chengsheng Zhu et al.   PLoS Computational Biology

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Insights into Dynamics of Mobile Genetic Elements in Hyperthermophilic Environments from Five New Thermococcus Plasmids

(2013) Mart Krupovic et al.   PLoS One

The human microbiome: A hot spot of microbial horizontal gene transfer

(2012) Li Liu et al.   GENOMICS

Monitoring of Horizontal Gene Transfer from Agricultural Microorganisms to Soil Bacteria and Analysis of Microbial Community in Soils

(2012) Sung Eun Kim   JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY

Functional evolution of C4 pyruvate, orthophosphate dikinase

(2011) Chris J. Chastain et al.   JOURNAL OF EXPERIMENTAL BOTANY

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

(2011) I. Pagani et al.   NUCLEIC ACIDS RESEARCH

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

Spatial complexity of soil organic matter forms at nanometre scales

(2008) Johannes Lehmann et al.   Nature Geoscience

Database resources of the National Center for Biotechnology Information

(2008) E. W. Sayers et al.   NUCLEIC ACIDS RESEARCH

GenBank

(2008) D. A. Benson et al.   NUCLEIC ACIDS RESEARCH