4.8 Article

An RNA editing/dsRNA binding-independent gene regulatory mechanism of ADARs and its clinical implication in cancer

Journal

NUCLEIC ACIDS RESEARCH
Volume 45, Issue 18, Pages 10436-10451

Publisher

OXFORD UNIV PRESS
DOI: 10.1093/nar/gkx667

Keywords

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Funding

  1. National Research Foundation Singapore
  2. Singapore Ministry of Education under its Research Centers of Excellence initiative
  3. NMRC Clinician Scientist-Individual Research Grant New Investigator Grant (CS-IRG NIG) [NMRC/CNIG/1117/2014]
  4. NMRC Clinician Scientist-Individual Research Grant (CS-IRG) [NMRC/CIRG/1412/2014]
  5. NUS Young Investigator Award (NUS YIA) [NUSYIA FY14 P22]
  6. Yong Siew Yoon Research Grant (Tier 2) (National University Cancer Institute, Singapore)
  7. NUS Start- up fund [NUHSRO/2015/095/SU/01]
  8. Singapore Ministry of Health's National Medical Research Council under its Singapore Translational Research (STaR) Investigator Award
  9. RNA Biology Center at the Cancer Science Institute of Singapore, NUS, as part of funding under the Singapore Ministry of Education's Tier 3 grants [MOE2014-T3-1-006]
  10. SingaporeMinistry of Education's Tier 3 grant [MOE2014-T3-1-006]

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Adenosine-to-inosine (A-to-I) RNA editing, catalyzed by Adenosine DeAminases acting on doublestranded RNA(dsRNA) (ADAR), occurs predominantly in the 3' untranslated regions (3' UTRs) of spliced mRNA. Here we uncover an unanticipated link between ADARs (ADAR1 and ADAR2) and the expression of target genes undergoing extensive 3' UTR editing. Using METTL7A (Methyltransferase Like 7A), a novel tumor suppressor gene with multiple editing sites at its 3' UTR, we demonstrate that its expression could be repressed by ADARs beyond their RNA editing and double-stranded RNA (dsRNA) binding functions. ADARs interact with Dicer to augment the processing of pre-miR-27a to mature miR-27a. Consequently, mature miR-27a targets the METTL7A 3' UTR to repress its expression level. In sum, our study unveils that the extensive 3' UTR editing of METTL7A is merely a footprint of ADAR binding, and there are a subset of target genes that are equivalently regulated by ADAR1 and ADAR2 through their non-canonical RNA editing and dsRNA binding-independent functions, albeit maybe less common. The functional significance of ADARs is much more diverse than previously appreciated and this gene regulatory function of ADARs is most likely to be of high biological importance beyond the best-studied editing function. This non-editing side of ADARs opens another door to target cancer.

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