The DifferentialNet database of differential protein–protein interactions in human tissues

DyNet: visualization and analysis of dynamic molecular interaction networks

(2016) Ivan H. Goenawan et al.   BIOINFORMATICS

Diffany: an ontology-driven framework to infer, visualise and analyse differential molecular networks

(2016) Sofie Van Landeghem et al.   BMC BIOINFORMATICS

The TissueNet v.2 database: A quantitative view of protein-protein interactions across human tissues

(2016) Omer Basha et al.   NUCLEIC ACIDS RESEARCH

The BioGRID interaction database: 2017 update

(2016) Andrew Chatr-aryamontri et al.   NUCLEIC ACIDS RESEARCH

A Human Interactome in Three Quantitative Dimensions Organized by Stoichiometries and Abundances

(2015) Marco Y. Hein et al.   CELL

The BioPlex Network: A Systematic Exploration of the Human Interactome

(2015) Edward L. Huttlin et al.   CELL

Fundamentals of protein interaction network mapping

(2015) J. Snider et al.   Molecular Systems Biology

Panorama of ancient metazoan macromolecular complexes

(2015) Cuihong Wan et al.   NATURE

Understanding multicellular function and disease with human tissue-specific networks

(2015) Casey S Greene et al.   NATURE GENETICS

MyProteinNet: build up-to-date protein interaction networks for organisms, tissues and user-defined contexts

(2015) Omer Basha et al.   NUCLEIC ACIDS RESEARCH

The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans

(2015) et al.   SCIENCE

Tissue-based map of the human proteome

(2015) M. Uhlen et al.   SCIENCE

A Proteome-Scale Map of the Human Interactome Network

(2014) Thomas Rolland et al.   CELL

A draft map of the human proteome

(2014) Min-Sik Kim et al.   NATURE

Mass-spectrometry-based draft of the human proteome

(2014) Mathias Wilhelm et al.   NATURE

OMIM.org: Online Mendelian Inheritance in Man (OMIM®), an online catalog of human genes and genetic disorders

(2014) Joanna S. Amberger et al.   NUCLEIC ACIDS RESEARCH

Comparative Analysis of Human Tissue Interactomes Reveals Factors Leading to Tissue-Specific Manifestation of Hereditary Diseases

(2014) Ruth Barshir et al.   PLoS Computational Biology

Cancer Evolution Is Associated with Pervasive Positive Selection on Globally Expressed Genes

(2014) Sheli L. Ostrow et al.   PLoS Genetics

Differential network analysis for the identification of condition-specific pathway activity and regulation

(2013) Gennaro Gambardella et al.   BIOINFORMATICS

The Genotype-Tissue Expression (GTEx) project

(2013) John Lonsdale et al.   NATURE GENETICS

The TissueNet database of human tissue protein–protein interactions

(2012) Ruth Barshir et al.   NUCLEIC ACIDS RESEARCH

Tissue-Specific Functional Networks for Prioritizing Phenotype and Disease Genes

(2012) Yuanfang Guan et al.   PLoS Computational Biology

Enhancing the Prioritization of Disease-Causing Genes through Tissue Specific Protein Interaction Networks

(2012) Oded Magger et al.   PLoS Computational Biology

Interactome Networks and Human Disease

(2011) Marc Vidal et al.   CELL

A statistical framework for differential network analysis from microarray data

(2010) Ryan Gill et al.   BMC BIOINFORMATICS

Rewiring of Genetic Networks in Response to DNA Damage

(2010) S. Bandyopadhyay et al.   SCIENCE

A network view of disease and compound screening

(2009) Eric E. Schadt et al.   NATURE REVIEWS DRUG DISCOVERY

MINT, the molecular interaction database: 2009 update

(2009) Arnaud Ceol et al.   NUCLEIC ACIDS RESEARCH

The IntAct molecular interaction database in 2010

(2009) B. Aranda et al.   NUCLEIC ACIDS RESEARCH

A large-scale analysis of tissue-specific pathology and gene expression of human disease genes and complexes

(2008) K. Lage et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA