iPTMnet: an integrated resource for protein post-translational modification network discovery

The neXtProt knowledgebase on human proteins: 2017 update

(2016) Pascale Gaudet et al.   NUCLEIC ACIDS RESEARCH

RLIMS-P 2.0: A Generalizable Rule-Based Information Extraction System for Literature Mining of Protein Phosphorylation Information

(2015) Manabu Torii et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

SIGNOR: a database of causal relationships between biological entities

(2015) Livia Perfetto et al.   NUCLEIC ACIDS RESEARCH

Identifying novel targets of oncogenic EGF receptor signaling in lung cancer through global phosphoproteomics

(2015) Xu Zhang et al.   PROTEOMICS

dbSNO 2.0: a resource for exploring structural environment, functional and disease association and regulatory network of protein S-nitrosylation

(2014) Yi-Ju Chen et al.   NUCLEIC ACIDS RESEARCH

PTMcode v2: a resource for functional associations of post-translational modifications within and between proteins

(2014) Pablo Minguez et al.   NUCLEIC ACIDS RESEARCH

PhosphoSitePlus, 2014: mutations, PTMs and recalibrations

(2014) Peter V. Hornbeck et al.   NUCLEIC ACIDS RESEARCH

UniProt: a hub for protein information

(2014)   NUCLEIC ACIDS RESEARCH

Studying post-translational modifications with protein interaction networks

(2013) Jonathan Woodsmith et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Proteoform: a single term describing protein complexity

(2013) Lloyd M Smith et al.   NATURE METHODS

P3DB 3.0: From plant phosphorylation sites to protein networks

(2013) Qiuming Yao et al.   NUCLEIC ACIDS RESEARCH

UniCarbKB: building a knowledge platform for glycoproteomics

(2013) Matthew P. Campbell et al.   NUCLEIC ACIDS RESEARCH

PubTator: a web-based text mining tool for assisting biocuration

(2013) Chih-Hsuan Wei et al.   NUCLEIC ACIDS RESEARCH

dbPTM 3.0: an informative resource for investigating substrate site specificity and functional association of protein post-translational modifications

(2012) Cheng-Tsung Lu et al.   NUCLEIC ACIDS RESEARCH

A comprehensive protein-centric ID mapping service for molecular data integration

(2011) H. Huang et al.   BIOINFORMATICS

Phosphorylation of maize eukaryotic translation initiation factor on Ser2 by catalytic subunit CK2

(2011) Elżbieta Lewandowska-Gnatowska et al.   MOLECULAR AND CELLULAR BIOCHEMISTRY

PomBase: a comprehensive online resource for fission yeast

(2011) V. Wood et al.   NUCLEIC ACIDS RESEARCH

Phospho.ELM: a database of phosphorylation sites--update 2011

(2010) H. Dinkel et al.   NUCLEIC ACIDS RESEARCH

Large-scale analysis of phosphorylated proteins in maize leaf

(2010) Ying-Dong Bi et al.   PLANTA

The PSI-MOD community standard for representation of protein modification data

(2008) Luisa Montecchi-Palazzi et al.   NATURE BIOTECHNOLOGY

PhosphoPep—a database of protein phosphorylation sites in model organisms

(2008) Bernd Bodenmiller et al.   NATURE BIOTECHNOLOGY

Human Protein Reference Database--2009 update

(2008) T. S. Keshava Prasad et al.   NUCLEIC ACIDS RESEARCH