Direct modulation of T-box riboswitch-controlled transcription by protein synthesis inhibitors

Riboswitch-Mediated Gene Regulation: Novel RNA Architectures Dictate Gene Expression Responses

(2016) Anna V. Sherwood et al.   Annual Review of Microbiology

Blast from the Past: Reassessing Forgotten Translation Inhibitors, Antibiotic Selectivity, and Resistance Mechanisms to Aid Drug Development

(2016) Stefan Arenz et al.   MOLECULAR CELL

(Meta-)genome mining for new ribo-regulators

(2016) M. O. A. Sommer et al.   SCIENCE

Term-seq reveals abundant ribo-regulation of antibiotics resistance in bacteria

(2016) D. Dar et al.   SCIENCE

A Two-Way Street: Regulatory Interplay between RNA Polymerase and Nascent RNA Structure

(2016) Jinwei Zhang et al.   TRENDS IN BIOCHEMICAL SCIENCES

Selective small-molecule inhibition of an RNA structural element

(2015) John A. Howe et al.   NATURE

T box riboswitches in Actinobacteria: Translational regulation via novel tRNA interactions

(2015) Anna V. Sherwood et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

AglyST-box riboswitch with species-specific structural features responding to both proteinogenic and nonproteinogenic tRNAGlyisoacceptors

(2015) Maria Apostolidi et al.   RNA

Unexpected versatility in bacterial riboswitches

(2015) J.R. Mellin et al.   TRENDS IN GENETICS

Structure and mechanism of the T-box riboswitches

(2015) Jinwei Zhang et al.   Wiley Interdisciplinary Reviews-RNA

The T box riboswitch: A novel regulatory RNA that utilizes tRNA as its ligand

(2014) Tina M. Henkin   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Novel aspects of RNA regulation in Staphylococcus aureus

(2014) Pierre Fechter et al.   FEBS LETTERS

Direct Evaluation of tRNA Aminoacylation Status by the T-Box Riboswitch Using tRNA-mRNA Stacking and Steric Readout

(2014) Jinwei Zhang et al.   MOLECULAR CELL

Regulatory RNAs Involved in Bacterial Antibiotic Resistance

(2014) David Lalaouna et al.   PLoS Pathogens

Analysis of the Small RNA Transcriptional Response in Multidrug-Resistant Staphylococcus aureus after Antimicrobial Exposure

(2013) Benjamin P. Howden et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

RegPrecise 3.0 – A resource for genome-scale exploration of transcriptional regulation in bacteria

(2013) Pavel S Novichkov et al.   BMC GENOMICS

Riboswitch Control of Aminoglycoside Antibiotic Resistance

(2013) Xu Jia et al.   CELL

Solution NMR determination of hydrogen bonding and base pairing between theglyQST box riboswitch Specifier domain and the anticodon loop of tRNAGly

(2013) Andrew T. Chang et al.   FEBS LETTERS

Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA

(2013) Jinwei Zhang et al.   NATURE

A universal RNA structural motif docking the elbow of tRNA in the ribosome, RNAse P and T-box leaders

(2013) Jean Lehmann et al.   NUCLEIC ACIDS RESEARCH

Two-codon T-box riboswitch binding two tRNAs

(2013) N. Y. Saad et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

T box RNA decodes both the information content and geometry of tRNA to affect gene expression

(2013) J. C. Grigg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sequence, structure, and stacking

(2013) Jason C Grigg et al.   RNA Biology

Structural Determinants for Geometry and Information Decoding of tRNA by T Box Leader RNA

(2013) Jason C. Grigg et al.   STRUCTURE

Tigecycline challenge triggers sRNA production in Salmonella enterica serovar Typhimurium

(2012) Jing Yu et al.   BMC MICROBIOLOGY

Riboswitch (T-box)-mediated Control of tRNA-dependent Amidation inClostridium acetobutylicumRationalizes Gene and Pathway Redundancy for Asparagine and Asparaginyl-tRNAAsnSynthesis

(2012) Nizar Y. Saad et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Riboswitches: Discovery of Drugs That Target Bacterial Gene-Regulatory RNAs

(2011) Katherine E. Deigan et al.   ACCOUNTS OF CHEMICAL RESEARCH

Characterization of a 1,4-disubstituted 1,2,3-triazole binding to T box antiterminator RNA

(2011) S. Zhou et al.   BIOORGANIC & MEDICINAL CHEMISTRY

Structure–activity studies of RNA-binding oxazolidinone derivatives

(2011) Iwona Maciagiewicz et al.   BIOORGANIC & MEDICINAL CHEMISTRY LETTERS

Anisotropy studies of tRNA-T box antiterminator RNA complex in the presence of 1,4-disubstituted 1,2,3-triazoles

(2011) S. Zhou et al.   BIOORGANIC & MEDICINAL CHEMISTRY LETTERS

Prospects for Riboswitch Discovery and Analysis

(2011) Ronald R. Breaker   MOLECULAR CELL

Ribozymes and Riboswitches: Modulation of RNA Function by Small Molecules

(2010) Jinwei Zhang et al.   BIOCHEMISTRY

Library of 1,4-Disubstituted 1,2,3-Triazole Analogs of Oxazolidinone RNA-Binding Agents

(2010) George Acquaah-Harrison et al.   JOURNAL OF COMBINATORIAL CHEMISTRY

Novel Riboswitch Ligand Analogs as Selective Inhibitors of Guanine-Related Metabolic Pathways

(2010) Jérôme Mulhbacher et al.   PLoS Pathogens

Biochemical Features and Functional Implications of the RNA-Based T-Box Regulatory Mechanism

(2009) A. Gutierrez-Preciado et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

On the role of an unusual tRNAGly isoacceptor in Staphylococcus aureus

(2008) Stamatina Giannouli et al.   BIOCHIMIE

Identification of neomycin B-binding site in T box antiterminator model RNA

(2008) Rajaneesh Anupam et al.   BIOORGANIC & MEDICINAL CHEMISTRY

4,5-Disubstituted oxazolidinones: High affinity molecular effectors of RNA function

(2008) Rajaneesh Anupam et al.   BIOORGANIC & MEDICINAL CHEMISTRY LETTERS

An in silico analysis of T-box regulated genes and T-box evolution in prokaryotes, with emphasis on prediction of substrate specificity of transporters

(2008) Michiel Wels et al.   BMC GENOMICS

Riboswitch RNAs: using RNA to sense cellular metabolism

(2008) T. M. Henkin   GENES & DEVELOPMENT

Agar and broth dilution methods to determine the minimal inhibitory concentration (MIC) of antimicrobial substances

(2008) Irith Wiegand et al.   Nature Protocols

Phylogeny.fr: robust phylogenetic analysis for the non-specialist

(2008) A. Dereeper et al.   NUCLEIC ACIDS RESEARCH

Comparative genomic analysis of T-box regulatory systems in bacteria

(2008) A. G. Vitreschak et al.   RNA