In vivo imaging of neural activity

Volumetric two-photon imaging of neurons using stereoscopy (vTwINS)

(2017) Alexander Song et al.   NATURE METHODS

A guide to light-sheet fluorescence microscopy for multiscale imaging

(2017) Rory M Power et al.   NATURE METHODS

Brain heating induced by near-infrared lasers during multiphoton microscopy

(2016) Kaspar Podgorski et al.   JOURNAL OF NEUROPHYSIOLOGY

Wide field-of-view, multi-region, two-photon imaging of neuronal activity in the mammalian brain

(2016) Jeffrey N Stirman et al.   NATURE BIOTECHNOLOGY

Fast volumetric calcium imaging across multiple cortical layers using sculpted light

(2016) Robert Prevedel et al.   NATURE METHODS

Simultaneous Multi-plane Imaging of Neural Circuits

(2016) Weijian Yang et al.   NEURON

Benchmarking Spike Rate Inference in Population Calcium Imaging

(2016) Lucas Theis et al.   NEURON

Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data

(2016) Eftychios A. Pnevmatikakis et al.   NEURON

Calcium imaging of neural circuits with extended depth-of-field light-sheet microscopy

(2016) Sean Quirin et al.   OPTICS LETTERS

Three-dimensional spatiotemporal focusing of holographic patterns

(2016) Oscar Hernandez et al.   Nature Communications

A large field of view two-photon mesoscope with subcellular resolution for in vivo imaging

(2016) Nicholas James Sofroniew et al.   eLife

A novel optical microscope for imaging large embryos and tissue volumes with sub-cellular resolution throughout

(2016) Gail McConnell et al.   eLife

SPED Light Sheet Microscopy: Fast Mapping of Biological System Structure and Function

(2015) Raju Tomer et al.   CELL

Imaging the Awake Visual Cortex with a Genetically Encoded Voltage Indicator

(2015) M. Carandini et al.   JOURNAL OF NEUROSCIENCE

Impermanence of dendritic spines in live adult CA1 hippocampus

(2015) Alessio Attardo et al.   NATURE

Continuous volumetric imaging via an optical phase-locked ultrasound lens

(2015) Lingjie Kong et al.   NATURE METHODS

Thalamus provides layer 4 of primary visual cortex with orientation- and direction-tuned inputs

(2015) Wenzhi Sun et al.   NATURE NEUROSCIENCE

Swept confocally-aligned planar excitation (SCAPE) microscopy for high-speed volumetric imaging of behaving organisms

(2015) Matthew B. Bouchard et al.   Nature Photonics

Extended field-of-view and increased-signal 3D holographic illumination with time-division multiplexing

(2015) Samuel J. Yang et al.   OPTICS EXPRESS

Ultra-large field-of-view two-photon microscopy

(2015) Philbert S. Tsai et al.   OPTICS EXPRESS

Rapid adaptive optical recovery of optimal resolution over large volumes

(2014) Kai Wang et al.   NATURE METHODS

Rational design of a high-affinity, fast, red calcium indicator R-CaMP2

(2014) Masatoshi Inoue et al.   NATURE METHODS

Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy

(2014) Robert Prevedel et al.   NATURE METHODS

Simultaneous cellular-resolution optical perturbation and imaging of place cell firing fields

(2014) John Peter Rickgauer et al.   NATURE NEUROSCIENCE

Spatially Selective Holographic Photoactivation and Functional Fluorescence Imaging in Freely Behaving Mice with a Fiberscope

(2014) Vivien Szabo et al.   NEURON

Cellular resolution optical access to brain regions in fissures: Imaging medial prefrontal cortex and grid cells in entorhinal cortex

(2014) Ryan J. Low et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lattice light-sheet microscopy: Imaging molecules to embryos at high spatiotemporal resolution

(2014) Bi-Chang Chen et al.   SCIENCE

Simultaneous imaging of neural activity in three dimensions

(2014) Sean Quirin et al.   Frontiers in Neural Circuits

Hybrid multiphoton volumetric functional imaging of large-scale bioengineered neuronal networks

(2014) Hod Dana et al.   Nature Communications

Adaptive optical microscopy: the ongoing quest for a perfect image

(2014) Martin J Booth   Light-Science & Applications

Ultrasensitive fluorescent proteins for imaging neuronal activity

(2013) Tsai-Wen Chen et al.   NATURE

Brain-wide 3D imaging of neuronal activity in Caenorhabditis elegans with sculpted light

(2013) Tina Schrödel et al.   NATURE METHODS

Long-term dynamics of CA1 hippocampal place codes

(2013) Yaniv Ziv et al.   NATURE NEUROSCIENCE

Spontaneous cortical activity alternates between motifs defined by regional axonal projections

(2013) Majid H Mohajerani et al.   NATURE NEUROSCIENCE

In vivo three-photon microscopy of subcortical structures within an intact mouse brain

(2013) Nicholas G. Horton et al.   Nature Photonics

Chronic Cellular Imaging of Entire Cortical Columns in Awake Mice Using Microprisms

(2013) Mark L. Andermann et al.   NEURON

Rapid 3D light-sheet microscopy with a tunable lens

(2013) Florian O. Fahrbach et al.   OPTICS EXPRESS

Instantaneous three-dimensional sensing using spatial light modulator illumination with extended depth of field imaging

(2013) Sean Quirin et al.   OPTICS EXPRESS

Encoded multisite two-photon microscopy

(2013) M. Ducros et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The NIH BRAIN Initiative

(2013) T. R. Insel et al.   SCIENCE

Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics

(2013) Jasper Akerboom et al.   Frontiers in Molecular Neuroscience

Deep tissue fluorescence imaging andin vivobiological applications

(2012) Viera Crosignani et al.   JOURNAL OF BIOMEDICAL OPTICS

Fast two-photon in vivo imaging with three-dimensional random-access scanning in large tissue volumes

(2012) Gergely Katona et al.   NATURE METHODS

Multicolor two-photon tissue imaging by wavelength mixing

(2012) Pierre Mahou et al.   NATURE METHODS

Extending the fundamental imaging-depth limit of multi-photon microscopy by imaging with photo-activatable fluorophores

(2012) Zhixing Chen et al.   OPTICS EXPRESS

Aberration-free three-dimensional multiphoton imaging of neuronal activity at kHz rates

(2012) E. J. Botcherby et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Wiring specificity in the direction-selectivity circuit of the retina

(2011) Kevin L. Briggman et al.   NATURE

Simultaneous two-photon calcium imaging at different depths with spatiotemporal multiplexing

(2011) Adrian Cheng et al.   NATURE METHODS

Optical sectioning microscopy with planar or structured illumination

(2011) Jerome Mertz   NATURE METHODS

Miniaturized integration of a fluorescence microscope

(2011) Kunal K Ghosh et al.   NATURE METHODS

Three-dimensional imaging and photostimulation by remote-focusing and holographic light patterning

(2011) F. Anselmi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Compact and flexible raster scanning multiphoton endoscope capable of imaging unstained tissue

(2011) D. R. Rivera et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fast two-layer two-photon imaging of neuronal cell populations using an electrically tunable lens

(2011) Benjamin F. Grewe et al.   Biomedical Optics Express

Optimizing multiphoton fluorescence microscopy light collection from living tissue by noncontact total emission detection (epiTED)

(2010) C.A. COMBS et al.   JOURNAL OF MICROSCOPY

High-speed in vivo calcium imaging reveals neuronal network activity with near-millisecond precision

(2010) Benjamin F Grewe et al.   NATURE METHODS

A compact acousto-optic lens for 2D and 3D femtosecond based 2-photon microscopy

(2010) Paul A. Kirkby et al.   OPTICS EXPRESS

Two-photon microscopy with diffractive optical elements and spatial light modulators

(2010) Brendon O. Watson   Frontiers in Neuroscience

Adaptive optics via pupil segmentation for high-resolution imaging in biological tissues

(2009) Na Ji et al.   NATURE METHODS

Automated Analysis of Cellular Signals from Large-Scale Calcium Imaging Data

(2009) Eran A. Mukamel et al.   NEURON

Temporal focusing with spatially modulated excitation

(2009) Eirini Papagiakoumou et al.   OPTICS EXPRESS

Image-based adaptive optics for two-photon microscopy

(2009) Delphine Débarre et al.   OPTICS LETTERS

High-speed, miniaturized fluorescence microscopy in freely moving mice

(2008) Benjamin A Flusberg et al.   NATURE METHODS

Three-dimensional random access multiphoton microscopy for functional imaging of neuronal activity

(2008) Gaddum Duemani Reddy et al.   NATURE NEUROSCIENCE

Patterned two-photon illumination by spatiotemporal shaping of ultrashort pulses

(2008) Eirini Papagiakoumou et al.   OPTICS EXPRESS

SLM microscopy: scanless two-photon imaging and photostimulation using spatial light modulators

(2008) Volodymyr Nikolenko   Frontiers in Neural Circuits

An optical technique for remote focusing in microscopy

(2007) E.J. Botcherby et al.   OPTICS COMMUNICATIONS