Towards standards for human fecal sample processing in metagenomic studies
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Towards standards for human fecal sample processing in metagenomic studies
Authors
Keywords
-
Journal
NATURE BIOTECHNOLOGY
Volume -, Issue -, Pages -
Publisher
Springer Nature
Online
2017-10-02
DOI
10.1038/nbt.3960
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Systematic improvement of amplicon marker gene methods for increased accuracy in microbiome studies
- (2016) Daryl M Gohl et al. NATURE BIOTECHNOLOGY
- Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota
- (2015) Kristoffer Forslund et al. NATURE
- Library preparation methodology can influence genomic and functional predictions in human microbiome research
- (2015) Marcus B. Jones et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Identifying personal microbiomes using metagenomic codes
- (2015) Eric A. Franzosa et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Temporal and technical variability of human gut metagenomes
- (2015) Anita Y Voigt et al. GENOME BIOLOGY
- Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
- (2014) Susannah J Salter et al. BMC BIOLOGY
- Processing faecal samples: a step forward for standards in microbial community analysis
- (2014) Alba Santiago et al. BMC MICROBIOLOGY
- Potential of fecal microbiota for early-stage detection of colorectal cancer
- (2014) G. Zeller et al. Molecular Systems Biology
- The Impact of Different DNA Extraction Kits and Laboratories upon the Assessment of Human Gut Microbiota Composition by 16S rRNA Gene Sequencing
- (2014) Nicholas A. Kennedy et al. PLoS One
- Relating the metatranscriptome and metagenome of the human gut
- (2014) E. A. Franzosa et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Choice of bacterial DNA extraction method from fecal material influences community structure as evaluated by metagenomic analysis
- (2014) Agata Wesolowska-Andersen et al. Microbiome
- Meta-analyses of studies of the human microbiota
- (2013) C. A. Lozupone et al. GENOME RESEARCH
- A comparison of the efficiency of five different commercial DNA extraction kits for extraction of DNA from faecal samples
- (2013) Shantelle Claassen et al. JOURNAL OF MICROBIOLOGICAL METHODS
- Richness of human gut microbiome correlates with metabolic markers
- (2013) Emmanuelle Le Chatelier et al. NATURE
- Metagenomic species profiling using universal phylogenetic marker genes
- (2013) Shinichi Sunagawa et al. NATURE METHODS
- Effect of DNA Extraction Methods and Sampling Techniques on the Apparent Structure of Cow and Sheep Rumen Microbial Communities
- (2013) Gemma Henderson et al. PLoS One
- A metagenome-wide association study of gut microbiota in type 2 diabetes
- (2012) Junjie Qin et al. NATURE
- Diversity, stability and resilience of the human gut microbiota
- (2012) Catherine A. Lozupone et al. NATURE
- The gut microbiota in IBD
- (2012) Chaysavanh Manichanh et al. Nature Reviews Gastroenterology & Hepatology
- Evaluation of Methods for the Extraction and Purification of DNA from the Human Microbiome
- (2012) Sanqing Yuan et al. PLoS One
- MOCAT: A Metagenomics Assembly and Gene Prediction Toolkit
- (2012) Jens Roat Kultima et al. PLoS One
- Molecular analysis of the luminal- and mucosal-associated intestinal microbiota in diarrhea-predominant irritable bowel syndrome
- (2011) Ian M. Carroll et al. AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY
- The currently used commercial DNA-extraction methods give different results of clostridial and actinobacterial populations derived from human fecal samples
- (2011) Johanna Maukonen et al. FEMS MICROBIOLOGY ECOLOGY
- eggNOG v3.0: orthologous groups covering 1133 organisms at 41 different taxonomic ranges
- (2011) S. Powell et al. NUCLEIC ACIDS RESEARCH
- Comparative analysis of fecal DNA extraction methods with phylogenetic microarray: Effective recovery of bacterial and archaeal DNA using mechanical cell lysis
- (2010) Anne Salonen et al. JOURNAL OF MICROBIOLOGICAL METHODS
- A human gut microbial gene catalogue established by metagenomic sequencing
- (2010) Junjie Qin et al. NATURE
- Comparison of DNA extraction kits for PCR-DGGE analysis of human intestinal microbial communities from fecal specimens
- (2010) Merlin W Ariefdjohan et al. Nutrition Journal
- Gut Microbiota in Human Adults with Type 2 Diabetes Differs from Non-Diabetic Adults
- (2010) Nadja Larsen et al. PLoS One
- Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns
- (2010) M. G. Dominguez-Bello et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes
- (2008) F Meyer et al. BMC BIOINFORMATICS
- Molecular eco-systems biology: towards an understanding of community function
- (2008) Jeroen Raes et al. NATURE REVIEWS MICROBIOLOGY
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started