Apigenin Impacts the Growth of the Gut Microbiota and Alters the Gene Expression of Enterococcus

Optimizing methods and dodging pitfalls in microbiome research

(2017) Dorothy Kim et al.   Microbiome

The effect of quercetin on genetic expression of the commensal gut microbes Bifidobacterium catenulatum, Enterococcus caccae and Ruminococcus gauvreauii

(2016) Jenni Firrman et al.   ANAEROBE

Novel Structural Components Contribute to the High Thermal Stability of Acyl Carrier Protein fromEnterococcus faecalis

(2015) Young-Guen Park et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Gradual pediocin PA-1 resistance in Enterococcus faecalis confers cross-protection to diverse pore-forming cationic antimicrobial peptides displaying changes in cell wall and mannose PTS expression

(2014) Rashmi Kumariya et al.   ANNALS OF MICROBIOLOGY

Multiple Complexes of Long Aliphatic N-Acyltransferases Lead to Synthesis of 2,6-Diacylated/2-Acyl-Substituted Glycopeptide Antibiotics, Effectively Killing Vancomycin-Resistant Enterococcus

(2014) Syue-Yi Lyu et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Molecular Chaperone Functions in Protein Folding and Proteostasis

(2013) Yujin E. Kim et al.   Annual Review of Biochemistry

Reducing the Level of Undecaprenyl Pyrophosphate Synthase Has Complex Effects on Susceptibility to Cell Wall Antibiotics

(2013) Yong Heon Lee et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Inefficient Translation Renders the Enterococcus faecalis fabK Enoyl-Acyl Carrier Protein Reductase Phenotypically Cryptic

(2013) H. Bi et al.   JOURNAL OF BACTERIOLOGY

Benefits of polyphenols on gut microbiota and implications in human health

(2013) Fernando Cardona et al.   JOURNAL OF NUTRITIONAL BIOCHEMISTRY

The Microbial Metabolites, Short-Chain Fatty Acids, Regulate Colonic Treg Cell Homeostasis

(2013) P. M. Smith et al.   SCIENCE

Daptomycin-Resistant Enterococcus faecalis Diverts the Antibiotic Molecule from the Division Septum and Remodels Cell Membrane Phospholipids

(2013) T. T. Tran et al.   mBio

Gut Microbial Metabolism of Polyphenols from Black Tea and Red Wine/Grape Juice Is Source-Specific and Colon-Region Dependent

(2012) F. A. van Dorsten et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Enterococci in the Environment

(2012) Muruleedhara N. Byappanahalli et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Proteomic and transcriptomic analysis of the response to bile stress of Lactobacillus casei BL23

(2012) C. Alcantara et al.   MICROBIOLOGY-SGM

Functional analysis of Borrelia burgdorferi uvrA in DNA damage protection

(2011) Mariya Sambir et al.   FEMS MICROBIOLOGY LETTERS

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Genetic Basis for In Vivo Daptomycin Resistance in Enterococci

(2011) Cesar A. Arias et al.   NEW ENGLAND JOURNAL OF MEDICINE

Regulation of induced colonic inflammation by Lactobacillus acidophilus deficient in lipoteichoic acid

(2011) M. Mohamadzadeh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Sampling and pyrosequencing methods for characterizing bacterial communities in the human gut using 16S sequence tags

(2010) Gary D Wu et al.   BMC MICROBIOLOGY

Proteomics and Transcriptomics Characterization of Bile Stress Response in ProbioticLactobacillus rhamnosusGG

(2010) Kerttu Koskenniemi et al.   MOLECULAR & CELLULAR PROTEOMICS

Apigenin: A Promising Molecule for Cancer Prevention

(2010) Sanjeev Shukla et al.   PHARMACEUTICAL RESEARCH

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Molecular Mechanisms of Ligand-Mediated Attenuation of DNA Binding by MarR Family Transcriptional Regulators

(2010) I. C. Perera et al.   Journal of Molecular Cell Biology

Management of Oxidative Stress inBacillus

(2009) Peter Zuber   Annual Review of Microbiology

The regulation of intestinal mucin MUC2 expression by short-chain fatty acids: implications for epithelial protection

(2009) Nanda Burger-van Paassen et al.   BIOCHEMICAL JOURNAL

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

The Bioavailability of Apigenin-7-Glucoside Is Influenced by Human Intestinal Microbiota in Rats

(2009) Laura Hanske et al.   JOURNAL OF NUTRITION

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

The Macaque Gut Microbiome in Health, Lentiviral Infection, and Chronic Enterocolitis

(2008) Philip McKenna et al.   PLoS Pathogens

Diversity of Firmicutes peptidoglycan hydrolases and specificities of those involved in daughter cell separation

(2008) Séverine Layec et al.   RESEARCH IN MICROBIOLOGY

Apigenin inhibits HGF-promoted invasive growth and metastasis involving blocking PI3K/Akt pathway and β4 integrin function in MDA-MB-231 breast cancer cells

(2007) Wei-Jiunn Lee et al.   TOXICOLOGY AND APPLIED PHARMACOLOGY