Role of seed germination in adaptation and reproductive isolation in Arabidopsis lyrata

Endosperm-based hybridization barriers explain the pattern of gene flow betweenArabidopsis lyrataandArabidopsis arenosain Central Europe

(2017) Clément Lafon-Placette et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cytonuclear incompatibility contributes to the early stages of speciation

(2016) Karen B. Barnard-Kubow et al.   EVOLUTION

Genomic Imprinting in the Endosperm Is Systematically Perturbed in Abortive Hybrid Tomato Seeds

(2016) Ana M. Florez-Rueda et al.   MOLECULAR BIOLOGY AND EVOLUTION

Disruption of endosperm development is a major cause of hybrid seed inviability betweenMimulus guttatusandMimulus nudatus

(2016) Elen Oneal et al.   NEW PHYTOLOGIST

Genetic loci with parent-of-origin effects cause hybrid seed lethality in crosses between Mimulus species

(2016) Austin G. Garner et al.   NEW PHYTOLOGIST

Early life stages contribute strongly to local adaptation inArabidopsis thaliana

(2016) Froukje M. Postma et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiple alleles at a single locus control seed dormancy in Swedish Arabidopsis

(2016) Envel Kerdaffrec et al.   eLife

Timing of shoot development transitions affects degree of perenniality in Arabidopsis lyrata (Brassicaceae)

(2015) David L. Remington et al.   BMC PLANT BIOLOGY

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Maternal environment affects the genetic basis of seed dormancy inArabidopsis thaliana

(2015) Froukje M. Postma et al.   MOLECULAR ECOLOGY

Multiple paths to similar germination behavior inArabidopsis thaliana

(2015) Liana T. Burghardt et al.   NEW PHYTOLOGIST

Exogenous selection rather than cytonuclear incompatibilities shapes asymmetrical fitness of reciprocalArabidopsishybrids

(2015) Graham Muir et al.   Ecology and Evolution

Non-reciprocal Interspecies Hybridization Barriers in the Capsella Genus Are Established in the Endosperm

(2015) Carolin A. Rebernig et al.   PLoS Genetics

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Photoreceptor partner FHY1 has an independent role in gene modulation and plant development under far-red light

(2014) F. Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic changes in flowering and morphology in response to adaptation to a high-latitude environment in Arabidopsis lyrata

(2013) Bénédicte Quilot-Turion et al.   ANNALS OF BOTANY

Cytonuclear Genomic Interactions and Hybrid Breakdown

(2013) Ronald S. Burton et al.   Annual Review of Ecology Evolution and Systematics

Investigating Incipient Speciation in Arabidopsis lyrata from Patterns of Transmission Ratio Distortion

(2013) J. Leppala et al.   GENETICS

Local adaptation and plasticity ofErysimum capitatumto altitude: its implications for responses to climate change

(2013) Eunsuk Kim et al.   JOURNAL OF ECOLOGY

SUPPRESSOR OF MORE AXILLARY GROWTH2 1 Controls Seed Germination and Seedling Development in Arabidopsis

(2013) J. P. Stanga et al.   PLANT PHYSIOLOGY

Co-Variation between Seed Dormancy, Growth Rate and Flowering Time Changes with Latitude in Arabidopsis thaliana

(2013) Marilyne Debieu et al.   PLoS One

Cytoplasmic Male Sterility Contributes to Hybrid Incompatibility Between Subspecies of Arabidopsis lyrata

(2013) Esa A. Aalto et al.   G3-Genes Genomes Genetics

Time scales of divergence and speciation among natural populations and subspecies of Arabidopsis lyrata (Brassicaceae)

(2012) Tanja Pyhäjärvi et al.   AMERICAN JOURNAL OF BOTANY

Seed dormancy distribution: explanatory ecological factors

(2012) Kristen Wagmann et al.   ANNALS OF BOTANY

CLINAL VARIATION IN SEED TRAITS INFLUENCING LIFE CYCLE TIMING INARABIDOPSIS THALIANA

(2012) Alicia Montesinos-Navarro et al.   EVOLUTION

GENETIC BASIS OF ADAPTATION IN ARABIDOPSIS THALIANA: LOCAL ADAPTATION AT THE SEED DORMANCY QTL DOG1

(2012) Ilkka Kronholm et al.   EVOLUTION

Role of vernalization and of duplicatedFLOWERING LOCUS Cin the perennialArabidopsis lyrata

(2012) Ulla Kemi et al.   NEW PHYTOLOGIST

Adaptation at range margins: common garden trials and the performance ofArabidopsis lyrataacross its northwestern European range

(2012) Philippine Vergeer et al.   NEW PHYTOLOGIST

Endosperm: food for humankind and fodder for scientific discoveries

(2012) Jing Li et al.   NEW PHYTOLOGIST

Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species

(2012) Brant K. Peterson et al.   PLoS One

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

NUCLEAR-CYTOPLASMIC INTERACTIONS REDUCE MALE FERTILITY IN HYBRIDS OF ARABIDOPSIS LYRATA SUBSPECIES

(2011) Johanna Leppälä et al.   EVOLUTION

THE GENETIC ARCHITECTURE OF ADAPTATION UNDER MIGRATION-SELECTION BALANCE

(2011) Sam Yeaman et al.   EVOLUTION

Multipoint maximum likelihood mapping in a full-sib family of an outbreeding species

(2011) J. W. VAN OOIJEN   Genetics Research

The Arabidopsis lyrata genome sequence and the basis of rapid genome size change

(2011) Tina T Hu et al.   NATURE GENETICS

Understanding chilling responses in Arabidopsis seeds and their contribution to life history

(2011) S. Penfield et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Hybrid Incompatibility in Arabidopsis Is Determined by a Multiple-Locus Genetic Network

(2011) D. Burkart-Waco et al.   PLANT PHYSIOLOGY

Germination, Postgermination Adaptation, and Species Ecological Ranges

(2010) Kathleen Donohue et al.   Annual Review of Ecology Evolution and Systematics

LOCAL ADAPTATION, PHENOTYPIC DIFFERENTIATION, AND HYBRID FITNESS IN DIVERGED NATURAL POPULATIONS OF ARABIDOPSIS LYRATA

(2010) Päivi H. Leinonen et al.   EVOLUTION

Natural variation for seed dormancy in Arabidopsis is regulated by additive genetic and molecular pathways

(2010) L. Bentsink et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Local adaptation in European populations of Arabidopsis lyrata (Brassicaceae)

(2009) P. H. Leinonen et al.   AMERICAN JOURNAL OF BOTANY

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

A Model Selection Approach for the Identification of Quantitative Trait Loci in Experimental Crosses, Allowing Epistasis

(2008) A. Manichaikul et al.   GENETICS

The strength and genetic basis of reproductive isolating barriers in flowering plants

(2008) D. B Lowry et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The Gibberellic Acid Signaling Repressor RGL2 Inhibits Arabidopsis Seed Germination by Stimulating Abscisic Acid Synthesis and ABI5 Activity

(2008) U. Piskurewicz et al.   PLANT CELL