Rapid identification of the purple stem (Ps) gene of Chinese kale (Brassica oleracea var. alboglabra) in a segregation distortion population by bulked segregant analysis and RNA sequencing

Mapping the Flavor Contributing Traits on "Fengwei Melon" (Cucumis melo L.) Chromosomes Using Parent Resequencing and Super Bulked-Segregant Analysis

(2016) Hong Zhang et al.   PLoS One

Identification of candidate genes associated with fertility restoration of cytoplasmic male-sterility in onion (Allium cepa L.) using a combination of bulked segregant analysis and RNA-seq

(2015) Sunggil Kim et al.   THEORETICAL AND APPLIED GENETICS

Transcriptional control of flavonoid biosynthesis by MYB–bHLH–WDR complexes

(2015) Wenjia Xu et al.   TRENDS IN PLANT SCIENCE

Anthocyanin biosynthetic genes in Brassica rapa

(2014) Ning Guo et al.   BMC GENOMICS

Engineering anthocyanin biosynthesis in plants

(2014) Yang Zhang et al.   CURRENT OPINION IN PLANT BIOLOGY

Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea

(2014) Isobel AP Parkin et al.   GENOME BIOLOGY

QTL-seq: rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations

(2013) Hiroki Takagi et al.   PLANT JOURNAL

The maizebrown midrib2(bm2) gene encodes a methylenetetrahydrofolate reductase that contributes to lignin accumulation

(2013) Ho Man Tang et al.   PLANT JOURNAL

Construction and analysis of a high-density genetic linkage map in cabbage (Brassica oleracea L. var. capitata)

(2012) Wanxing Wang et al.   BMC GENOMICS

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Retrotransposons Control Fruit-Specific, Cold-Dependent Accumulation of Anthocyanins in Blood Oranges

(2012) E. Butelli et al.   PLANT CELL

Gene Mapping via Bulked Segregant RNA-Seq (BSR-Seq)

(2012) Sanzhen Liu et al.   PLoS One

The Purple Cauliflower Arises from Activation of a MYB Transcription Factor

(2010) L.-W. Chiu et al.   PLANT PHYSIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fluctuating selection: the perpetual renewal of adaptation in variable environments

(2009) G. Bell   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Transcriptional regulation of anthocyanin biosynthesis in red cabbage

(2009) Youxi Yuan et al.   PLANTA

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Delphinidin, an anthocyanidin in pigmented fruits and vegetables, induces apoptosis and cell cycle arrest in human colon cancer HCT116 cells

(2008) Jung-Mi Yun et al.   MOLECULAR CARCINOGENESIS

Eleven Golden Rules of Quantitative RT-PCR

(2008) M. K. Udvardi et al.   PLANT CELL