Efficient Inference of Recent and Ancestral Recombination within Bacterial Populations
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Efficient Inference of Recent and Ancestral Recombination within Bacterial Populations
Authors
Keywords
-
Journal
MOLECULAR BIOLOGY AND EVOLUTION
Volume 34, Issue 5, Pages 1167-1182
Publisher
Oxford University Press (OUP)
Online
2017-01-30
DOI
10.1093/molbev/msx066
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- How clonal are bacteria over time?
- (2016) B Jesse Shapiro CURRENT OPINION IN MICROBIOLOGY
- Commensal Streptococci Serve as a Reservoir for β-Lactam Resistance Genes in Streptococcus pneumoniae
- (2015) Anders Jensen et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Roary: rapid large-scale prokaryote pan genome analysis
- (2015) Andrew J. Page et al. BIOINFORMATICS
- ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes
- (2015) Xavier Didelot et al. PLoS Computational Biology
- Variable recombination dynamics during the emergence, transmission and ‘disarming’ of a multidrug-resistant pneumococcal clone
- (2014) Nicholas J Croucher et al. BMC BIOLOGY
- Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
- (2014) Nicholas J. Croucher et al. NUCLEIC ACIDS RESEARCH
- Diversification of bacterial genome content through distinct mechanisms over different timescales
- (2014) Nicholas J. Croucher et al. Nature Communications
- Population genomics of post-vaccine changes in pneumococcal epidemiology
- (2013) Nicholas J Croucher et al. NATURE GENETICS
- Horizontal gene transfer and the evolution of bacterial and archaeal population structure
- (2013) Martin F. Polz et al. TRENDS IN GENETICS
- Robust Demographic Inference from Genomic and SNP Data
- (2013) Laurent Excoffier et al. PLoS Genetics
- An extended multi-locus molecular typing schema for Streptococcus pneumoniae demonstrates that a limited number of capsular switch events is responsible for serotype heterogeneity of closely related strains from different countries
- (2012) Giovanni Crisafulli et al. INFECTION GENETICS AND EVOLUTION
- Population Genomics of Early Events in the Ecological Differentiation of Bacteria
- (2012) B. J. Shapiro et al. SCIENCE
- Directed networks reveal genomic barriers and DNA repair bypasses to lateral gene transfer among prokaryotes
- (2011) O. Popa et al. GENOME RESEARCH
- Detection of recombination events in bacterial genomes from large population samples
- (2011) Pekka Marttinen et al. NUCLEIC ACIDS RESEARCH
- Bacterial recombination promotes the evolution of multi-drug-resistance in functionally diverse populations
- (2011) G. G. Perron et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Rapid Pneumococcal Evolution in Response to Clinical Interventions
- (2011) N. J. Croucher et al. SCIENCE
- Impact of recombination on bacterial evolution
- (2010) Xavier Didelot et al. TRENDS IN MICROBIOLOGY
- Hyper-Recombination, Diversity, and Antibiotic Resistance in Pneumococcus
- (2009) W. P. Hanage et al. SCIENCE
- The Bacterial Species Challenge: Making Sense of Genetic and Ecological Diversity
- (2009) C. Fraser et al. SCIENCE
- Why do bacteria engage in homologous recombination?
- (2009) Michiel Vos TRENDS IN MICROBIOLOGY
- Phylogenetic inference under recombination using Bayesian stochastic topology selection
- (2008) Alex Webb et al. BIOINFORMATICS
- Role of Conjugative Elements in the Evolution of the Multidrug-Resistant Pandemic Clone Streptococcus pneumoniaeSpain23F ST81
- (2008) N. J. Croucher et al. JOURNAL OF BACTERIOLOGY
- The role of Streptococcus pneumoniae virulence factors in host respiratory colonization and disease
- (2008) Aras Kadioglu et al. NATURE REVIEWS MICROBIOLOGY
- Modular networks and cumulative impact of lateral transfer in prokaryote genome evolution
- (2008) T. Dagan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started