Differential Retention of Gene Functions in a Secondary Metabolite Cluster

Draft genome sequence and chemical profiling of Fusarium langsethiae, an emerging producer of type A trichothecenes

(2016) Erik Lysøe et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Identification of a 12-Gene Fusaric Acid Biosynthetic Gene Cluster in Fusarium Species Through Comparative and Functional Genomics

(2015) Daren W. Brown et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Dimensions of Horizontal Gene Transfer in Eukaryotic Microbial Pathogens

(2015) Emile Gluck-Thaler et al.   PLoS Pathogens

Ecology Drives the Distribution of Specialized Tyrosine Metabolism Modules in Fungi

(2014) George H. Greene et al.   Genome Biology and Evolution

The Evolution of Fungal Metabolic Pathways

(2014) Jennifer H. Wisecaver et al.   PLoS Genetics

Repeated loss of an anciently horizontally transferred gene cluster in Botrytis

(2013) Matthew A. Campbell et al.   MYCOLOGIA

A Functional Bikaverin Biosynthesis Gene Cluster in Rare Strains of Botrytis cinerea Is Positively Controlled by VELVET

(2013) Julia Schumacher et al.   PLoS One

Physical linkage of metabolic genes in fungi is an adaptation against the accumulation of toxic intermediate compounds

(2013) K. L. McGary et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Horizontal Transfer and Death of a Fungal Secondary Metabolic Gene Cluster

(2012) Matthew A. Campbell et al.   Genome Biology and Evolution

Why biosynthetic genes for chemical defense compounds cluster

(2012) Adam M. Takos et al.   TRENDS IN PLANT SCIENCE

BUCKy: Gene tree/species tree reconciliation with Bayesian concordance analysis

(2010) Bret R. Larget et al.   BIOINFORMATICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Horizontal Transfer of a Large and Highly Toxic Secondary Metabolic Gene Cluster between Fungi

(2010) Jason C. Slot et al.   CURRENT BIOLOGY

Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium

(2010) Li-Jun Ma et al.   NATURE

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION

Biosynthesis and Role in Virulence of the Histone Deacetylase Inhibitor Depudecin fromAlternaria brassicicola

(2009) Wanessa D. Wight et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Histone Deacetylase Genes inArabidopsisDevelopment

(2008) Courtney Hollender et al.   Journal of Integrative Plant Biology

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

The evolution of gene collectives: How natural selection drives chemical innovation

(2008) M. A. Fischbach et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic Islands in the Pathogenic Filamentous Fungus Aspergillus fumigatus

(2008) Natalie D. Fedorova et al.   PLoS Genetics

Evidence for horizontal transfer of a secondary metabolite gene cluster between fungi

(2008) Nora Khaldi et al.   GENOME BIOLOGY