Tracing the origin of the NS1 A188V substitution responsible for recent enhancement of Zika virus Asian genotype infectivity

Evolutionary enhancement of Zika virus infectivity in Aedes aegypti mosquitoes

(2017) Yang Liu et al.   NATURE

Zika virus evolution and spread in the Americas

(2017) Hayden C. Metsky et al.   NATURE

Establishment and cryptic transmission of Zika virus in Brazil and the Americas

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Zika virus: a previously slow pandemic spreads rapidly through the Americas

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(2016) N. R. Faria et al.   SCIENCE

How Did Zika Virus Emerge in the Pacific Islands and Latin America?

(2016) John H.-O. Pettersson et al.   mBio

CD-HIT Suite: a web server for clustering and comparing biological sequences

(2010) Ying Huang et al.   BIOINFORMATICS

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

Bayesian Phylogeography Finds Its Roots

(2009) Philippe Lemey et al.   PLoS Computational Biology

jModelTest: Phylogenetic Model Averaging

(2008) D. Posada   MOLECULAR BIOLOGY AND EVOLUTION