Image-based modelling of skeletal muscle oxygenation

Estimating oxygen distribution from vasculature in three-dimensional tumour tissue

(2016) David Robert Grimes et al.   Journal of the Royal Society Interface

Three-dimensional cardiac computational modelling: methods, features and applications

(2015) Alejandro Lopez-Perez et al.   Biomedical Engineering Online

An Image-Based Model of Fluid Flow Through Lymph Nodes

(2015) Laura J. Cooper et al.   BULLETIN OF MATHEMATICAL BIOLOGY

Light sheet-based fluorescence microscopy (LSFM) for the quantitative imaging of cells and tissues

(2015) Francesco Pampaloni et al.   CELL AND TISSUE RESEARCH

Quantifying the Microvascular Origin of BOLD-fMRI from First Principles with Two-Photon Microscopy and an Oxygen-Sensitive Nanoprobe

(2015) L. Gagnon et al.   JOURNAL OF NEUROSCIENCE

The role of the microvascular tortuosity in tumor transport phenomena

(2015) R. Penta et al.   JOURNAL OF THEORETICAL BIOLOGY

Krogh-Cylinder and Infinite-Domain Models for Washout of an Inert Diffusible Solute from Tissue

(2015) Timothy W. Secomb   MICROCIRCULATION

Hematocrit Distribution and Tissue Oxygenation in Large Microcirculatory Networks

(2015) Ian G. Gould et al.   MICROCIRCULATION

Microvascular blood flow monitoring with laser speckle contrast imaging using the generalized differences algorithm

(2015) Anne Humeau-Heurtier et al.   MICROVASCULAR RESEARCH

Homogenization of two fluid flow in porous media

(2015) K. R. Daly et al.   PROCEEDINGS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES

Morphological Characterisation of Unstained and Intact Tissue Micro-architecture by X-ray Computed Micro- and Nano-Tomography

(2015) Lucy A. Walton et al.   Scientific Reports

Regulation of the microvascular circulation in the leg muscles, pancreas and small intestine in rats

(2015) Hisashi Maeda et al.   SpringerPlus

Optical Clearing in Dense Connective Tissues to Visualize Cellular Connectivity In Situ

(2015) Sarah Calve et al.   PLoS One

The Finite Cell Method: A Review in the Context of Higher-Order Structural Analysis of CAD and Image-Based Geometric Models

(2014) Dominik Schillinger et al.   ARCHIVES OF COMPUTATIONAL METHODS IN ENGINEERING

Modelling capillary oxygen supply capacity in mixed muscles: Capillary domains revisited

(2014) Abdullah A. Al-Shammari et al.   JOURNAL OF THEORETICAL BIOLOGY

Synchrotron radiation imaging is a powerful tool to image brain microvasculature

(2014) Mengqi Zhang et al.   MEDICAL PHYSICS

Dynamics of Microvascular Blood Flow and Oxygenation Measured Simultaneously in Human Skin

(2014) Katarzyna Z. Kuliga et al.   MICROCIRCULATION

Micro-CT of rodents: State-of-the-art and future perspectives

(2014) D.P. Clark et al.   Physica Medica-European Journal of Medical Physics

A Novel In Vivo Vascular Imaging Approach for Hierarchical Quantification of Vasculature Using Contrast Enhanced Micro-Computed Tomography

(2014) Laura Nebuloni et al.   PLoS One

Bi-Directional X-Ray Phase-Contrast Mammography

(2014) Kai Scherer et al.   PLoS One

Axial Plane Optical Microscopy

(2014) Tongcang Li et al.   Scientific Reports

Maternal Obesity, Inflammation, and Developmental Programming

(2014) Stephanie A. Segovia et al.   Biomed Research International

X-ray dose delivered during a longitudinal micro-CT study has no adverse effect on cardiac and pulmonary tissue in C57BL/6 mice

(2013) Sarah A Detombe et al.   ACTA RADIOLOGICA

Multiscale Computational Models of Complex Biological Systems

(2013) Joseph Walpole et al.   Annual Review of Biomedical Engineering

Modelling Tumour Oxygenation, Reoxygenation and Implications on Treatment Outcome

(2013) Iuliana Toma-Dasu et al.   Computational and Mathematical Methods in Medicine

Skeletal muscle capillary function: contemporary observations and novel hypotheses

(2013) David C. Poole et al.   EXPERIMENTAL PHYSIOLOGY

A framework for user driven data management

(2013) Mark Scott et al.   INFORMATION SYSTEMS

An exploratory study of contrast agents for soft tissue visualization by means of high resolution X-ray computed tomography imaging

(2013) E. PAUWELS et al.   JOURNAL OF MICROSCOPY

A perfusion procedure for imaging of the mouse cerebral vasculature by X-ray micro-CT

(2013) Sahar Ghanavati et al.   JOURNAL OF NEUROSCIENCE METHODS

High resolution synchrotron imaging of wheat root hairs growing in soil and image based modelling of phosphate uptake

(2013) Samuel D. Keyes et al.   NEW PHYTOLOGIST

In vivocharacterization of tumor vasculature using iodine and gold nanoparticles and dual energy micro-CT

(2013) Darin P Clark et al.   PHYSICS IN MEDICINE AND BIOLOGY

High-Resolution Micro-CT for Morphologic and Quantitative Assessment of the Sinusoid in Human Cavernous Hemangioma of the Liver

(2013) Jinghao Duan et al.   PLoS One

X-ray intravital microscopy for functional imaging in rat hearts using synchrotron radiation coronary microangiography

(2013) K. Umetani et al.   REVIEW OF SCIENTIFIC INSTRUMENTS

X-ray grating-based phase tomography for 3D histology

(2013) Irene Zanette et al.   RSC Advances

Multiscale Imaging and Computational Modeling of Blood Flow in the Tumor Vasculature

(2012) Eugene Kim et al.   ANNALS OF BIOMEDICAL ENGINEERING

X-Ray Tomography Applied to the Characterization of Highly Porous Materials

(2012) Eric Maire   Annual Review of Materials Research

Re-evaluating the Use of Voronoi Tessellations in the Assessment of Oxygen Supply from Capillaries in Muscle

(2012) A. A. Al-Shammari et al.   BULLETIN OF MATHEMATICAL BIOLOGY

Quantitative Measurements in 3-Dimensional Datasets of Mouse Lymph Nodes Resolve Organ-Wide Functional Dependencies

(2012) Jürgen Mayer et al.   Computational and Mathematical Methods in Medicine

Dual-Energy Micro-Computed Tomography Imaging of Radiation-Induced Vascular Changes in Primary Mouse Sarcomas

(2012) Everett J. Moding et al.   INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS

Coronary artery wall imaging in mice using osmium tetroxide and micro-computed tomography (micro-CT)

(2012) Vinay M. Pai et al.   JOURNAL OF ANATOMY

Oxygen Transport in the Microcirculation and Its Regulation

(2012) Roland N. Pittman   MICROCIRCULATION

Polycystic Kidneys Have Decreased Vascular Density: A Micro-CT Study

(2012) Rende Xu et al.   MICROCIRCULATION

Three-dimensional quantification of capillary networks in healthy and cancerous tissues of two mice

(2012) Sabrina Lang et al.   MICROVASCULAR RESEARCH

A method for quantitative characterization of growth in the 3-D structure of rat pulmonary arteries

(2012) Hedi Razavi et al.   MICROVASCULAR RESEARCH

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

X-ray phase contrast for CO2microangiography

(2012) U Lundström et al.   PHYSICS IN MEDICINE AND BIOLOGY

X-ray phase-contrast imaging: from pre-clinical applications towards clinics

(2012) Alberto Bravin et al.   PHYSICS IN MEDICINE AND BIOLOGY

Quantitative Ex-Vivo Micro-Computed Tomographic Imaging of Blood Vessels and Necrotic Regions within Tumors

(2012) Charlene M. Downey et al.   PLoS One

Effects of Fiber Type and Size on the Heterogeneity of Oxygen Distribution in Exercising Skeletal Muscle

(2012) Gang Liu et al.   PLoS One

Characterization of X-ray Dose in Murine Animals Using microCT, a New Low-Dose Detector and nanoDot Dosimeters

(2012) Dustin R. Osborne et al.   PLoS One

Bioactive Glass Foam Scaffolds are Remodelled by Osteoclasts and Support the Formation of Mineralized Matrix and Vascular Networks In Vitro

(2012) Swati Midha et al.   Advanced Healthcare Materials

Micro-Computed Tomography for Hemorrhage Disruption of Mouse Brain Vasculature

(2012) Bohua Xie et al.   Translational Stroke Research

Oxygen gradients in the microcirculation

(2011) R. N. Pittman   Acta Physiologica

Developmental origins of noncommunicable disease: population and public health implications

(2011) Mark Hanson et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Dynamic Synchrotron Imaging of Diabetic Rat Coronary Microcirculation In Vivo

(2011) Mathew J. Jenkins et al.   ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY

Light Sheet Fluorescence Microscopy

(2011) Peter A. Santi   JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY

The Microcirculation: A Target for Developmental Priming

(2011) GERALDINE F. CLOUGH et al.   MICROCIRCULATION

X-ray microtomography in biology

(2011) Ryuta Mizutani et al.   MICRON

Regressed three-dimensional capillary network and inhibited angiogenic factors in the soleus muscle of non-obese rats with type 2 diabetes

(2011) Hiroyo Kondo et al.   Nutrition & Metabolism

Optimization of MicroCT Imaging and Blood Vessel Diameter Quantitation of Preclinical Specimen Vasculature with Radiopaque Polymer Injection Medium

(2011) Sergio X. Vasquez et al.   PLoS One

Module-based multiscale simulation of angiogenesis in skeletal muscle

(2011) Gang Liu et al.   Theoretical Biology and Medical Modelling

Evaluation of Tumor Microenvironment in an Animal Model using a Nanoparticle Contrast Agent in Computed Tomography Imaging

(2010) Ketan B. Ghaghada et al.   ACADEMIC RADIOLOGY

Defects in oxygen supply to skeletal muscle of prediabetic ZDF rats

(2010) Christopher G. Ellis et al.   AMERICAN JOURNAL OF PHYSIOLOGY-HEART AND CIRCULATORY PHYSIOLOGY

BoneJ: Free and extensible bone image analysis in ImageJ

(2010) Michael Doube et al.   BONE

Rapid 3D Phenotyping of Cardiovascular Development in Mouse Embryos by Micro-CT With Iodine Staining

(2010) Karl Degenhardt et al.   Circulation-Cardiovascular Imaging

Anatomical and microstructural imaging of angiogenesis

(2010) Fabian Kiessling et al.   EUROPEAN JOURNAL OF NUCLEAR MEDICINE AND MOLECULAR IMAGING

Advances in imaging the blood and aqueous vessels of the ocular limbus

(2010) E.L. van der Merwe et al.   EXPERIMENTAL EYE RESEARCH

Guidelines for assessment of bone microstructure in rodents using micro-computed tomography

(2010) Mary L Bouxsein et al.   JOURNAL OF BONE AND MINERAL RESEARCH

X-ray microtomography

(2010) Eric N. Landis et al.   MATERIALS CHARACTERIZATION

Hemodynamic Systems Analysis of Capillary Network Remodeling During the Progression of Type 2 Diabetes

(2010) KELLY F. BENEDICT et al.   MICROCIRCULATION

Quantitation of Microcomputed Tomography-Imaged Ocular Microvasculature

(2010) ROBERT C. ATWOOD et al.   MICROCIRCULATION

Tumor Microvasculature and Microenvironment: Novel Insights Through Intravital Imaging in Pre-Clinical Models

(2010) DAI FUKUMURA et al.   MICROCIRCULATION

Blood Flow and Cell-Free Layer in Microvessels

(2010) DMITRY A. FEDOSOV et al.   MICROCIRCULATION

Three-dimensional analysis of tumour vascular corrosion casts using stereoimaging and micro-computed tomography

(2010) A.A. Folarin et al.   MICROVASCULAR RESEARCH

Simultaneous measurement of RBC velocity, flux, hematocrit and shear rate in vascular networks

(2010) Walid S Kamoun et al.   NATURE METHODS

Low-dose, simple, and fast grating-based X-ray phase-contrast imaging

(2010) P. Zhu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Selective plane illumination microscopy techniques in developmental biology

(2009) J. Huisken et al.   DEVELOPMENT

MicroCT for developmental biology: A versatile tool for high-contrast 3D imaging at histological resolutions

(2009) Brian D. Metscher   DEVELOPMENTAL DYNAMICS

3D Visualization and Measurement of Capillaries Supplying Metabolically Different Fiber Types in the Rat Extensor Digitorum Longus Muscle During Denervation and Reinnervation

(2009) Jiîí Janáček et al.   JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY

Simultaneous 3D visualization and quantification of murine bone and bone vasculature using micro-computed tomography and vascular replica

(2009) Philipp Schneider et al.   MICROSCOPY RESEARCH AND TECHNIQUE

The estimation error of skeletal muscle capillary supply is significantly reduced by 3D method

(2009) Vita Čebašek et al.   MICROVASCULAR RESEARCH

Micro-CT of Corrosion Casts for Use in the Computer-Aided Design of Microvasculature

(2009) William Lafayette Mondy et al.   TISSUE ENGINEERING PART C-METHODS

Computer-aided design of microvasculature systems for use in vascular scaffold production

(2009) William Lafayette Mondy et al.   Biofabrication

Imaging angiogenesis and the microenvironment 

(2008) DAI FUKUMURA et al.   APMIS

A review of imaging techniques for systems biology

(2008) Armen R Kherlopian et al.   BMC Systems Biology

Development of in vivo μCT evaluation of neovascularisation in tissue engineered bone constructs

(2008) B.J.R.F. Bolland et al.   BONE

Theoretical Modeling in Hemodynamics of Microcirculation

(2008) Jack Lee et al.   MICROCIRCULATION

Theoretical Models of Microvascular Oxygen Transport to Tissue

(2008) Daniel Goldman   MICROCIRCULATION