Comment on “A Database of Human Immune Receptor Alleles Recovered from Population Sequencing Data”

A Database of Human Immune Receptor Alleles Recovered from Population Sequencing Data

(2017) Yaxuan Yu et al.   JOURNAL OF IMMUNOLOGY

Defining KIR and HLA Class I Genotypes at Highest Resolution via High-Throughput Sequencing

(2016) Paul J. Norman et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Production of individualized V gene databases reveals high levels of immunoglobulin genetic diversity

(2016) Martin M. Corcoran et al.   Nature Communications

Estimating Copy Number and Allelic Variation at the Immunoglobulin Heavy Chain Locus Using Short Reads

(2016) Shishi Luo et al.   PLoS Computational Biology

Ability To Develop Broadly Neutralizing HIV-1 Antibodies Is Not Restricted by the Germline Ig Gene Repertoire

(2015) Cathrine Scheepers et al.   JOURNAL OF IMMUNOLOGY

A global reference for human genetic variation

(2015) Richard A. Gibbs et al.   NATURE

Improved genome inference in the MHC using a population reference graph

(2015) Alexander Dilthey et al.   NATURE GENETICS

The mouse antibody heavy chain repertoire is germline-focused and highly variable between inbred strains

(2015) Andrew M. Collins et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Automated analysis of high-throughput B-cell sequencing data reveals a high frequency of novel immunoglobulin V gene segment alleles

(2015) Daniel Gadala-Maria et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Toward better understanding of artifacts in variant calling from high-coverage samples

(2014) Heng Li   BIOINFORMATICS

Sequencing of the human IG light chain loci from a hydatidiform mole BAC library reveals locus-specific signatures of genetic diversity

(2014) C T Watson et al.   GENES AND IMMUNITY

Immunoglobulin heavy variable (IGHV) genes and alleles: new entities, new names and implications for research and prognostication in chronic lymphocytic leukaemia

(2014) Aliki Xochelli et al.   IMMUNOGENETICS

Complete Haplotype Sequence of the Human Immunoglobulin Heavy-Chain Variable, Diversity, and Joining Genes and Characterization of Allelic and Copy-Number Variation

(2013) Corey T. Watson et al.   AMERICAN JOURNAL OF HUMAN GENETICS

An integrated map of genetic variation from 1,092 human genomes

(2012)   NATURE

Genomic screening by 454 pyrosequencing identifies a new human IGHV gene and sixteen other new IGHV allelic variants

(2011) Yan Wang et al.   IMMUNOGENETICS

The Inference of Phased Haplotypes for the Immunoglobulin H Chain V Region Gene Loci by Analysis of VDJ Gene Rearrangements

(2011) M. J. Kidd et al.   JOURNAL OF IMMUNOLOGY

Optimized filtering reduces the error rate in detecting genomic variants by short-read sequencing

(2011) Joke Reumers et al.   NATURE BIOTECHNOLOGY

Copy number variation and association over T-cell receptor genes—influence of DNA source

(2010) Christine Schwienbacher et al.   IMMUNOGENETICS

Individual Variation in the Germline Ig Gene Repertoire Inferred from Variable Region Gene Rearrangements

(2010) S. D. Boyd et al.   JOURNAL OF IMMUNOLOGY

A map of human genome variation from population-scale sequencing

(2010) Richard M. Durbin et al.   NATURE

dbDNV: a resource of duplicated gene nucleotide variants in human genome

(2010) M.-R. Ho et al.   NUCLEIC ACIDS RESEARCH

Single nucleotide differences (SNDs) in the dbSNP database may lead to errors in genotyping and haplotyping studies

(2009) Lucia Musumeci et al.   HUMAN MUTATION

The Legal Framework for Reproducible Scientific Research: Licensing and Copyright

(2008) Victoria Stodden   COMPUTING IN SCIENCE & ENGINEERING