Shared characteristics underpinning C4leaf maturation derived from analysis of multiple C3and C4species ofFlaveria

Cross species selection scans identify components of C 4 photosynthesis in the grasses

(2016) Pu Huang et al.   JOURNAL OF EXPERIMENTAL BOTANY

REDUCED CHLOROPLAST COVERAGEgenes fromArabidopsis thalianahelp to establish the size of the chloroplast compartment

(2016) Robert M. Larkin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNA-Seq based phylogeny recapitulates previous phylogeny of the genus Flaveria (Asteraceae) with some modifications

(2015) Ming-Ju Amy Lyu et al.   BMC EVOLUTIONARY BIOLOGY

Two forward genetic screens for vein density mutants in sorghum converge on a cytochrome P450 gene in the brassinosteroid pathway

(2015) Govinda Rizal et al.   PLANT JOURNAL

SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads

(2014) Y. Xie et al.   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Three distinct biochemical subtypes of C4 photosynthesis? A modelling analysis

(2014) Yu Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

PsbN Is Required for Assembly of the Photosystem II Reaction Center inNicotiana tabacum

(2014) Salar Torabi et al.   PLANT CELL

Comparative Transcriptome Atlases Reveal Altered Gene Expression Modules between Two Cleomaceae C3 and C4 Plant Species

(2014) C. Kulahoglu et al.   PLANT CELL

Deep Evolutionary Comparison of Gene Expression Identifies Parallel Recruitment of Trans-Factors in Two Independent Origins of C4 Photosynthesis

(2014) Sylvain Aubry et al.   PLoS Genetics

The role of photorespiration during the evolution of C4 photosynthesis in the genus Flaveria

(2014) Julia Mallmann et al.   eLife

IDBA-tran: a more robust de novo de Bruijn graph assembler for transcriptomes with uneven expression levels

(2013) Yu Peng et al.   BIOINFORMATICS

BayesHammer: Bayesian clustering for error correction in single-cell sequencing

(2013) Sergey I Nikolenko et al.   BMC GENOMICS

Evolution of C4 Photosynthesis in the Genus Flaveria: Establishment of a Photorespiratory CO2 Pump

(2013) S. Schulze et al.   PLANT CELL

The Operation of Two Decarboxylases, Transamination, and Partitioning of C4 Metabolic Processes between Mesophyll and Bundle Sheath Cells Allows Light Capture To Be Balanced for the Maize C4 Pathway

(2013) C. Bellasio et al.   PLANT PHYSIOLOGY

Phenotypic landscape inference reveals multiple evolutionary paths to C4 photosynthesis

(2013) Ben P Williams et al.   eLife

Using evolution as a guide to engineer kranz-type c4 photosynthesis

(2013) Thomas L. Slewinski   Frontiers in Plant Science

A Local Maximum in Gibberellin Levels Regulates Maize Leaf Growth by Spatial Control of Cell Division

(2012) Hilde Nelissen et al.   CURRENT BIOLOGY

Scarecrow Plays a Role in Establishing Kranz Anatomy in Maize Leaves

(2012) Thomas L. Slewinski et al.   PLANT AND CELL PHYSIOLOGY

You're so vein: bundle sheath physiology, phylogeny and evolution in C3 and C4 plants

(2012) HOWARD GRIFFITHS et al.   PLANT CELL AND ENVIRONMENT

Anatomical enablers and the evolution of C4photosynthesis in grasses

(2012) Pascal-Antoine Christin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Efficient de novo assembly of large genomes using compressed data structures

(2011) J. T. Simpson et al.   GENOME RESEARCH

Evolution of the C4 photosynthetic mechanism: are there really three C4 acid decarboxylation types?

(2011) R. T. Furbank   JOURNAL OF EXPERIMENTAL BOTANY

The C4 plant lineages of planet Earth

(2011) R. F. Sage et al.   JOURNAL OF EXPERIMENTAL BOTANY

Systems Analysis of a Maize Leaf Developmental Gradient Redefines the Current C4 Model and Provides Candidates for Regulation

(2011) T. R. Pick et al.   PLANT CELL

Evolution of C4Photosynthesis in the GenusFlaveria: How Many and Which Genes Does It Take to Make C4?

(2011) Udo Gowik et al.   PLANT CELL

Plant MCM proteins: role in DNA replication and beyond

(2011) Narendra Tuteja et al.   PLANT MOLECULAR BIOLOGY

Mutations in MYB3R1 and MYB3R4 Cause Pleiotropic Developmental Defects and Preferential Down-Regulation of Multiple G2/M-Specific Genes in Arabidopsis

(2011) N. Haga et al.   PLANT PHYSIOLOGY

Protein Transport into Chloroplasts

(2010) Hsou-min Li et al.   Annual Review of Plant Biology

The developmental dynamics of the maize leaf transcriptome

(2010) Pinghua Li et al.   NATURE GENETICS

Photorespiration: players, partners and origin

(2010) Hermann Bauwe et al.   TRENDS IN PLANT SCIENCE

Shifts in leaf vein density through accelerated vein formation in C4Flaveria (Asteraceae)

(2009) Athena D. McKown et al.   ANNALS OF BOTANY

Suppressor of gamma response 1 (SOG1) encodes a putative transcription factor governing multiple responses to DNA damage

(2009) K. Yoshiyama et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA