Selective aggregation of the splicing factor Hsh155 suppresses splicing upon genotoxic stress

Protein aggregation as a mechanism of adaptive cellular responses

(2016) Juha Saarikangas et al.   CURRENT GENETICS

Rtt107 BRCT domains act as a targeting module in the DNA damage response

(2016) Grace P. Leung et al.   DNA REPAIR

Recruitment of Saccharomyces cerevisiae Cmr1/Ydl156w to Coding Regions Promotes Transcription Genome Wide

(2016) Jeffery W. Jones et al.   PLoS One

Splicing-Mediated Autoregulation Modulates Rpl22p Expression in Saccharomyces cerevisiae

(2016) Jason Gabunilas et al.   PLoS Genetics

Quantitative Profiling of Single Formalin Fixed Tumour Sections: proteomics for translational research

(2016) Christopher S. Hughes et al.   Scientific Reports

Reversible, Specific, Active Aggregates of Endogenous Proteins Assemble upon Heat Stress

(2015) Edward W.J. Wallace et al.   CELL

Yeast Proteome Dynamics from Single Cell Imaging and Automated Analysis

(2015) Yolanda T. Chong et al.   CELL

Compartment-specific aggregases direct distinct nuclear and cytoplasmic aggregate deposition

(2015) S. B. Miller et al.   EMBO JOURNAL

Molecular mechanisms of ribosomal protein gene coregulation

(2015) Rohit Reja et al.   GENES & DEVELOPMENT

Prion aggregate structure in yeast cells is determined by the Hsp104-Hsp110 disaggregase machinery

(2015) Jonathan O’Driscoll et al.   JOURNAL OF CELL BIOLOGY

Using Peptide-Level Proteomics Data for Detecting Differentially Expressed Proteins

(2015) Tomi Suomi et al.   JOURNAL OF PROTEOME RESEARCH

2016 update of the PRIDE database and its related tools

(2015) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

Cmr1/WDR76 defines a nuclear genotoxic stress body linking genome integrity and protein quality control

(2015) Irene Gallina et al.   Nature Communications

Protein aggregates are associated with replicative aging without compromising protein quality control

(2015) Juha Saarikangas et al.   eLife

Organelle-Based Aggregation and Retention of Damaged Proteins in Asymmetrically Dividing Cells

(2014) Chuankai Zhou et al.   CELL

Polarization of the Endoplasmic Reticulum by ER-Septin Tethering

(2014) Jesse T. Chao et al.   CELL

Ultrasensitive proteome analysis using paramagnetic bead technology

(2014) C. S. Hughes et al.   Molecular Systems Biology

ProteomeXchange provides globally coordinated proteomics data submission and dissemination

(2014) Juan A Vizcaíno et al.   NATURE BIOTECHNOLOGY

Genome Destabilizing Mutator Alleles Drive Specific Mutational Trajectories in Saccharomyces cerevisiae

(2013) P. C. Stirling et al.   GENETICS

A novel single-cell screening platform reveals proteome plasticity during yeast stress responses

(2013) Michal Breker et al.   JOURNAL OF CELL BIOLOGY

Competition between Pre-mRNAs for the Splicing Machinery Drives Global Regulation of Splicing

(2013) Elizabeth M. Munding et al.   MOLECULAR CELL

Genome-wide single-cell-level screen for protein abundance and localization changes in response to DNA damage in S. cerevisiae

(2013) Aprotim Mazumder et al.   NUCLEIC ACIDS RESEARCH

Saccharomyces cerevisiae Genetics Predicts Candidate Therapeutic Genetic Interactions at the Mammalian Replication Fork

(2013) Derek M. van Pel et al.   G3-Genes Genomes Genetics

R-loop-mediated genome instability in mRNA cleavage and polyadenylation mutants

(2012) P. C. Stirling et al.   GENES & DEVELOPMENT

Cellular Memory of Acquired Stress Resistance in Saccharomyces cerevisiae

(2012) Q. Guan et al.   GENETICS

Molecular chaperones and stress-inducible protein-sorting factors coordinate the spatiotemporal distribution of protein aggregates

(2012) Liliana Malinovska et al.   MOLECULAR BIOLOGY OF THE CELL

Tandem fluorescent protein timers for in vivo analysis of protein dynamics

(2012) Anton Khmelinskii et al.   NATURE BIOTECHNOLOGY

Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress

(2012) Johnny M. Tkach et al.   NATURE CELL BIOLOGY

Genomic phenotyping of the essential and non-essential yeast genome detects novel pathways for alkylation resistance

(2011) J Peter Svensson et al.   BMC Systems Biology

Introns within Ribosomal Protein Genes Regulate the Production and Function of Yeast Ribosomes

(2011) Julie Parenteau et al.   CELL

Expression of yeast high mobility group protein HMO1 is regulated by TOR signaling

(2011) LiJuan Xiao et al.   GENE

The Complete Spectrum of Yeast Chromosome Instability Genes Identifies Candidate CIN Cancer Genes and Functional Roles for ASTRA Complex Components

(2011) Peter C. Stirling et al.   PLoS Genetics

Sfp1 Interaction with TORC1 and Mrs6 Reveals Feedback Regulation on TOR Signaling

(2009) Harri Lempiäinen et al.   MOLECULAR CELL

Cdc14 inhibits transcription by RNA polymerase I during anaphase

(2009) Andrés Clemente-Blanco et al.   NATURE

A comprehensive strategy enabling high-resolution functional analysis of the yeast genome

(2008) David K Breslow et al.   NATURE METHODS