Elucidation of stable intermediates in urea-induced unfolding pathway of human carbonic anhydrase IX

Protein folding alterations in amyotrophic lateral sclerosis

(2016) Sonam Parakh et al.   BRAIN RESEARCH

Protein aggregation and neurodegenerative diseases: From theory to therapy

(2016) Vijay Kumar et al.   EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY

Spectroscopic and MD simulation studies on unfolding processes of mitochondrial carbonic anhydrase VA induced by urea

(2016) Danish Idrees et al.   JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS

Denatured states of yeast cytochrome c induced by heat and guanidinium chloride are structurally and thermodynamically different

(2016) Sobia Zaidi et al.   JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS

GdmCl-induced unfolding studies of human carbonic anhydrase IX: a combined spectroscopic and MD simulation approach

(2016) Amresh Prakash et al.   JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS

TopoGromacs: Automated Topology Conversion from CHARMM to GROMACS within VMD

(2016) Josh V. Vermaas et al.   Journal of Chemical Information and Modeling

In vitro and in silico studies of urea-induced denaturation of yeast iso-1-cytochromecand its deletants at pH 6.0 and 25 °C

(2014) Md. Anzarul Haque et al.   JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS

Toward an atomistic description of the urea-denatured state of proteins

(2013) M. Candotti et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Insilico study of the A2AR–D2R kinetics and interfacial contact surface for heteromerization

(2012) Amresh Prakash et al.   AMINO ACIDS

Chemical Unfolding of Chicken Villin Headpiece in Aqueous Dimethyl Sulfoxide Solution: Cosolvent Concentration Dependence, Pathway, and Microscopic Mechanism

(2012) Susmita Roy et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Molecular dynamics simulations of wild type and mutants of human complement receptor 2 complexed with C3d

(2012) Hua Wan et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Role of Solvation Effects in Protein Denaturation: From Thermodynamics to Single Molecules and Back

(2011) Jeremy L. England et al.   Annual Review of Physical Chemistry

SwissParam: A fast force field generation tool for small organic molecules

(2011) Vincent Zoete et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Comment on “Urea-Mediated Protein Denaturation: A Consensus View”

(2011) Ruhong Zhou et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Electronic Polarizability and the Effective Pair Potentials of Water

(2010) I. V. Leontyev et al.   Journal of Chemical Theory and Computation

Relation between Free Energy Landscapes of Proteins and Dynamics

(2010) Gia G. Maisuradze et al.   Journal of Chemical Theory and Computation

Computer-aided drug design platform using PyMOL

(2010) Markus A. Lill et al.   JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN

Equilibrium Study of Protein Denaturation by Urea

(2010) Deepak R. Canchi et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Ligand Binding and Hydration in Protein Misfolding: Insights from Studies of Prion and p53 Tumor Suppressor Proteins†

(2009) Jerson L. Silva et al.   ACCOUNTS OF CHEMICAL RESEARCH

Deconstructing the Native State: Energy Landscapes, Function, and Dynamics of Globular Proteins

(2009) Pavel I. Zhuravlev et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Urea-Mediated Protein Denaturation: A Consensus View

(2009) Atanu Das et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Crystal structure of the catalytic domain of the tumor-associated human carbonic anhydrase IX

(2009) V. Alterio et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Urea and Guanidinium Chloride Denature Protein L in Different Ways in Molecular Dynamics Simulations

(2008) C. Camilloni et al.   BIOPHYSICAL JOURNAL

Carbonic Anhydrase as a Model for Biophysical and Physical-Organic Studies of Proteins and Protein−Ligand Binding

(2008) Vijay M. Krishnamurthy et al.   CHEMICAL REVIEWS

Reversible geminate recombination of hydrogen-bonded water molecule pair

(2008) Omer Markovitch et al.   JOURNAL OF CHEMICAL PHYSICS