Fundamental differences in diversity and genomic population structure between Atlantic and Pacific Prochlorococcus

Global biogeography of Prochlorococcus genome diversity in the surface ocean

(2016) Alyssa G Kent et al.   ISME Journal

Niche partitioning and biogeography of high light adapted Prochlorococcus across taxonomic ranks in the North Pacific

(2016) Alyse A Larkin et al.   ISME Journal

BlastKOALA and GhostKOALA: KEGG Tools for Functional Characterization of Genome and Metagenome Sequences

(2016) Minoru Kanehisa et al.   JOURNAL OF MOLECULAR BIOLOGY

Estimating planktonic diversity through spatial dominance patterns in a model ocean

(2016) Alice Soccodato et al.   Marine Genomics

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

CyanoBase: a large-scale update on its 20th anniversary

(2016) Takatomo Fujisawa et al.   NUCLEIC ACIDS RESEARCH

Delineating ecologically significant taxonomic units from global patterns of marine picocyanobacteria

(2016) Gregory K. Farrant et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Drift in ocean currents impacts intergenerational microbial exposure to temperature

(2016) Martina A. Doblin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Variable but persistent coexistence of Prochlorococcus ecotypes along temperature gradients in the ocean's surface mixed layer

(2016) Jeremy W. Chandler et al.   Environmental Microbiology Reports

Wind and sunlight shape microbial diversity in surface waters of the North Pacific Subtropical Gyre

(2015) Jessica A Bryant et al.   ISME Journal

Temporal dynamics ofProchlorococcuscells with the potential for nitrate assimilation in the subtropical Atlantic and Pacific oceans

(2015) Paul M. Berube et al.   LIMNOLOGY AND OCEANOGRAPHY

Physiology and evolution of nitrate acquisition in Prochlorococcus

(2014) Paul M Berube et al.   ISME Journal

Microbial oceanography and the Hawaii Ocean Time-series programme

(2014) David M. Karl et al.   NATURE REVIEWS MICROBIOLOGY

Prochlorococcus: the structure and function of collective diversity

(2014) Steven J. Biller et al.   NATURE REVIEWS MICROBIOLOGY

Strong Genome-Wide Selection Early in the Evolution of Prochlorococcus Resulted in a Reduced Genome through the Loss of a Large Number of Small Effect Genes

(2014) Zhiyi Sun et al.   PLoS One

Multispecies diel transcriptional oscillations in open ocean heterotrophic bacterial assemblages

(2014) E. A. Ottesen et al.   SCIENCE

Single-Cell Genomics Reveals Hundreds of Coexisting Subpopulations in Wild Prochlorococcus

(2014) N. Kashtan et al.   SCIENCE

Hidden Diversity in Honey Bee Gut Symbionts Detected by Single-Cell Genomics

(2014) Philipp Engel et al.   PLoS Genetics

Present and future global distributions of the marine Cyanobacteria Prochlorococcus and Synechococcus

(2013) P. Flombaum et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Single cell genomics: an individual look at microbes

(2012) Ramunas Stepanauskas   CURRENT OPINION IN MICROBIOLOGY

Ecology of uncultured Prochlorococcus clades revealed through single-cell genomics and biogeographic analysis

(2012) Rex R Malmstrom et al.   ISME Journal

Models and estimators linking individual-based and sample-based rarefaction, extrapolation and comparison of assemblages

(2012) R. K. Colwell et al.   Journal of Plant Ecology

Seasonality in Ocean Microbial Communities

(2012) S. J. Giovannoni et al.   SCIENCE

Repeated, Selection-Driven Genome Reduction of Accessory Genes in Experimental Populations

(2012) Ming-Chun Lee et al.   PLoS Genetics

Genomic Analysis at the Single-Cell Level

(2011) Tomer Kalisky et al.   Annual Review of Genetics

On the culture-independent assessment of the diversity and distribution of Prochlorococcus

(2011) Martin Mühling   ENVIRONMENTAL MICROBIOLOGY

Massively parallel rRNA gene sequencing exacerbates the potential for biased community diversity comparisons due to variable library sizes

(2011) Thomas M. Gihring et al.   ENVIRONMENTAL MICROBIOLOGY

A giant cell surface protein in Synechococcus WH8102 inhibits feeding by a dinoflagellate predator

(2011) Suzanne L. Strom et al.   ENVIRONMENTAL MICROBIOLOGY

Phosphite utilization by the marine picocyanobacterium Prochlorococcus MIT9301

(2011) Asunción Martínez et al.   ENVIRONMENTAL MICROBIOLOGY

Genomic island variability facilitates Prochlorococcus–virus coexistence

(2011) Sarit Avrani et al.   NATURE

ProPortal: a resource for integrated systems biology of Prochlorococcus and its phage

(2011) L. Kelly et al.   NUCLEIC ACIDS RESEARCH

Temporal dynamics of Prochlorococcus ecotypes in the Atlantic and Pacific oceans

(2010) Rex R Malmstrom et al.   ISME Journal

Ecosystem-specific selection pressures revealed through comparative population genomics

(2010) M. L. Coleman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Patterns of Diversity in Marine Phytoplankton

(2010) A. D. Barton et al.   SCIENCE

Prochlorococcus: Advantages and Limits of Minimalism

(2009) Frédéric Partensky et al.   Annual Review of Marine Science

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Atomic force microscopy reveals microscale networks and possible symbioses among pelagic marine bacteria

(2009) F Malfatti et al.   AQUATIC MICROBIAL ECOLOGY

Ecological Genomics of Marine Picocyanobacteria

(2009) D. J. Scanlan et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Whole Genome Amplification and De novo Assembly of Single Bacterial Cells

(2009) Sébastien Rodrigue et al.   PLoS One

Widespread metabolic potential for nitrite and nitrate assimilation among Prochlorococcus ecotypes

(2009) A. C. Martiny et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

Taxonomic resolution, ecotypes and the biogeography ofProchlorococcus

(2008) Adam C. Martiny et al.   ENVIRONMENTAL MICROBIOLOGY