Transcriptome Analysis of Tomato Leaf Spot Pathogen Fusarium proliferatum: De novo Assembly, Expression Profiling, and Identification of Candidate Effectors

Species-specific optical genosensors for the detection of mycotoxigenic Fusarium fungi in food samples

(2016) Riikka Peltomaa et al.   ANALYTICA CHIMICA ACTA

First report of tomato leaf spot caused by Fusarium proliferatum in China

(2016) Mei-Ling Gao et al.   CANADIAN JOURNAL OF PLANT PATHOLOGY

Fusarium proliferatum from rainwater and rooted garlic show genetic and pathogenicity differences

(2016) Jéssica Gil-Serna et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Histopathological assessment of the infection of maize leaves by Fusarium graminearum, F. proliferatum, and F. verticillioides

(2016) Thi Thanh Xuan Nguyen et al.   Fungal Biology

First report of sour rot on tomato caused by Galactomyces reessii in Thailand

(2016) Nakarin Suwannarach et al.   JOURNAL OF GENERAL PLANT PATHOLOGY

Identification of pathogenicity-related genes inFusarium oxysporumf. sp.cepae

(2016) Andrew Taylor et al.   MOLECULAR PLANT PATHOLOGY

Identification of Multiple Phytotoxins Produced by Fusarium virguliforme Including a Phytotoxic Effector (FvNIS1) Associated With Sudden Death Syndrome Foliar Symptoms

(2016) Hao-Xun Chang et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Genome-Wide Analysis of Small Secreted Cysteine-Rich Proteins Identifies Candidate Effector Proteins Potentially Involved in Fusarium graminearum−Wheat Interactions

(2016) Shunwen Lu et al.   PHYTOPATHOLOGY

Secretome analysis of virulentPyrenophora teresf. teresisolates

(2016) Ismail A. Ismail et al.   PROTEOMICS

Genome wide transcriptome profiling of Fusarium oxysporum f sp. ciceris conidial germination reveals new insights into infection-related genes

(2016) Mamta Sharma et al.   Scientific Reports

First report of Fusarium proliferatum causing root rot in soybean (Glycine max L.) in Canada

(2015) K.F. Chang et al.   CROP PROTECTION

Genome-Wide Analysis in Three Fusarium Pathogens Identifies Rapidly Evolving Chromosomes and Genes Associated with Pathogenicity

(2015) Jana Sperschneider et al.   Genome Biology and Evolution

Putative effector genes detected inFusarium oxysporumfrom natural ecosystems of Australia

(2015) L. O. Rocha et al.   PLANT PATHOLOGY

Global Genome and Transcriptome Analyses of Magnaporthe oryzae Epidemic Isolate 98-06 Uncover Novel Effectors and Pathogenicity-Related Genes, Revealing Gene Gain and Lose Dynamics in Genome Evolution

(2015) Yanhan Dong et al.   PLoS Pathogens

Fusarium verticillioides SGE1 Is Required for Full Virulence and Regulates Expression of Protein Effector and Secondary Metabolite Biosynthetic Genes

(2014) Daren W. Brown et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

A selective agar medium for isolation, enumeration and morphological identification of Fusarium proliferatum

(2014) Yochai Isack et al.   PHYTOPARASITICA

Deciphering the Cryptic Genome: Genome-wide Analyses of the Rice Pathogen Fusarium fujikuroi Reveal Complex Regulation of Secondary Metabolism and Novel Metabolites

(2013) Philipp Wiemann et al.   PLoS Pathogens

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

A Highly Conserved Effector in Fusarium oxysporum Is Required for Full Virulence on Arabidopsis

(2011) Louise F. Thatcher et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics

(2010) Koh Aoki et al.   BMC GENOMICS

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Fungal Effector Proteins

(2009) Ioannis Stergiopoulos et al.   Annual Review of Phytopathology

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Recent progress in discovery and functional analysis of effector proteins of fungal and oomycete plant pathogens

(2009) Jeffrey G Ellis et al.   CURRENT OPINION IN PLANT BIOLOGY

Emerging Concepts in Effector Biology of Plant-Associated Organisms

(2009) Saskia A. Hogenhout et al.   MOLECULAR PLANT-MICROBE INTERACTIONS