Reconsideration of the systematics of Peniculida (Protista, Ciliophora) based on SSU rRNA gene sequences and new morphological features of Marituja and Disematostoma

Beyond the “Code”: A Guide to the Description and Documentation of Biodiversity in Ciliated Protists (Alveolata, Ciliophora)

(2017) Alan Warren et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Selective predation by a harpacticoid copepod on ciliates in phytotelmata: a laboratory experiment

(2016) Krzysztof Wiackowski et al.   HYDROBIOLOGIA

Utility of combining morphological characters, nuclear and mitochondrial genes: An attempt to resolve the conflicts of species identification for ciliated protists

(2016) Yan Zhao et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The All-Data-Based Evolutionary Hypothesis of Ciliated Protists with a Revised Classification of the Phylum Ciliophora (Eukaryota, Alveolata)

(2016) Feng Gao et al.   Scientific Reports

New Paramecium (Ciliophora, Oligohymenophorea) congeners shape our view on its biodiversity

(2015) Sascha Krenek et al.   ORGANISMS DIVERSITY & EVOLUTION

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Description ofGlaucomides bromelicolan. gen., n. sp. (Ciliophora, Tetrahymenida), a Macrostome Forming Inhabitant of Bromeliads (Bromeliaceae), Including Redescriptions ofGlaucoma scintillansandG. reniformis

(2013) Wilhelm Foissner   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Three-gene based phylogeny of the Urostyloidea (Protista, Ciliophora, Hypotricha), with notes on classification of some core taxa

(2013) Jie Huang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Genetic Differentiation of the Mitochondrial Cytochrome Oxidase c Subunit I Gene in Genus Paramecium (Protista, Ciliophora)

(2013) Yan Zhao et al.   PLoS One

Morphology of three new marine Frontonia species (Ciliophora; Peniculida) with note on the phylogeny of this genus

(2012) Xinpeng Fan et al.   EUROPEAN JOURNAL OF PROTISTOLOGY

Intraspecific differentiation of Paramecium novaurelia strains (Ciliophora, Protozoa) inferred from phylogenetic analysis of ribosomal and mitochondrial DNA variation

(2012) Sebastian Tarcz   EUROPEAN JOURNAL OF PROTISTOLOGY

Two new marine scuticociliates, Sathrophilus planus n. sp. and Pseudoplatynematum dengi n. sp., with improved definition of Pseudoplatynematum (Ciliophora, Oligohymenophora)

(2010) Xinpeng Fan et al.   EUROPEAN JOURNAL OF PROTISTOLOGY

Two novel marine Frontonia species, Frontonia mengi spec. nov. and Frontonia magna spec. nov. (Protozoa; Ciliophora), with notes on their phylogeny based on small-subunit rRNA gene sequence data

(2010) X. Fan et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

An Alignment Confidence Score Capturing Robustness to Guide Tree Uncertainty

(2010) O. Penn et al.   MOLECULAR BIOLOGY AND EVOLUTION

GUIDANCE: a web server for assessing alignment confidence scores

(2010) O. Penn et al.   NUCLEIC ACIDS RESEARCH

SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building

(2009) M. Gouy et al.   MOLECULAR BIOLOGY AND EVOLUTION