SIDR: simultaneous isolation and parallel sequencing of genomic DNA and total RNA from single cells
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Title
SIDR: simultaneous isolation and parallel sequencing of genomic DNA and total RNA from single cells
Authors
Keywords
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Journal
GENOME RESEARCH
Volume 28, Issue 1, Pages 75-87
Publisher
Cold Spring Harbor Laboratory
Online
2017-12-06
DOI
10.1101/gr.223263.117
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- (2016) Mauro J. Muraro et al. Cell Systems
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- (2016) Alireza Ahadi et al. Scientific Reports
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- (2015) Siddharth S Dey et al. NATURE BIOTECHNOLOGY
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- (2014) Yong Wang et al. NATURE
- Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity
- (2014) Sébastien A Smallwood et al. NATURE METHODS
- Defining functional DNA elements in the human genome
- (2014) M. Kellis et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Single-Cell RNA-Seq Reveals Dynamic, Random Monoallelic Gene Expression in Mammalian Cells
- (2014) Q. Deng et al. SCIENCE
- Massively Parallel Single-Cell RNA-Seq for Marker-Free Decomposition of Tissues into Cell Types
- (2014) D. A. Jaitin et al. SCIENCE
- Co-detection and sequencing of genes and transcripts from the same single cells facilitated by a microfluidics platform
- (2014) Lin Han et al. Scientific Reports
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- (2013) Matthew J. Hangauer et al. PLoS Genetics
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- Highly multiplexed and strand-specific single-cell RNA 5′ end sequencing
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- (2011) Sheila Fisher et al. GENOME BIOLOGY
- Cellular Heterogeneity: Do Differences Make a Difference?
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- Triton X-100 concentration effects on membrane permeability of a single HeLa cell by scanning electrochemical microscopy (SECM)
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- LINE-1 methylation patterns of different loci in normal and cancerous cells
- (2008) Chureerat Phokaew et al. NUCLEIC ACIDS RESEARCH
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