Ecological and functional effects of fungal endophytes on wood decomposition

A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling

(2016) Rosalinda D’Amore et al.   BMC GENOMICS

Fungal endophytes as priority colonizers initiating wood decomposition

(2016) Zewei Song et al.   FUNCTIONAL ECOLOGY

FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

(2016) Nhu H. Nguyen et al.   Fungal Ecology

Localizing gene regulation reveals a staggered wood decay mechanism for the brown rot fungusPostia placenta

(2016) Jiwei Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Historical Contingency in Community Assembly: Integrating Niches, Species Pools, and Priority Effects

(2015) Tadashi Fukami   Annual Review of Ecology Evolution and Systematics

Neglected role of fungal community composition in explaining variation in wood decay rates

(2015) A. van der Wal et al.   ECOLOGY

Habitat models of wood-inhabiting fungi along a decay gradient of Norway spruce logs

(2015) Tiina Rajala et al.   Fungal Ecology

Antagonistic fungal interactions influence carbon dioxide evolution from decomposing wood

(2015) Jennifer Hiscox et al.   Fungal Ecology

Priority effects during fungal community establishment in beech wood

(2015) Jennifer Hiscox et al.   ISME Journal

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Influence of Hyphal Inoculum potential on the Competitive Success of Fungi Colonizing Wood

(2015) Zewei Song et al.   MICROBIAL ECOLOGY

Fungal Traits That Drive Ecosystem Dynamics on Land

(2015) Kathleen K. Treseder et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Signature Wood Modifications Reveal Decomposer Community History

(2015) Jonathan S. Schilling et al.   PLoS One

When the forest dies: the response of forest soil fungi to a bark beetle-induced tree dieback

(2014) Martina Štursová et al.   ISME Journal

Parsing ecological signal from noise in next generation amplicon sequencing

(2014) Nhu H. Nguyen et al.   NEW PHYTOLOGIST

Sequence Depth, Not PCR Replication, Improves Ecological Inference from Next Generation DNA Sequencing

(2014) Dylan P. Smith et al.   PLoS One

Climate fails to predict wood decomposition at regional scales

(2014) Mark A. Bradford et al.   Nature Climate Change

Extracellular enzyme production and cheating in Pseudomonas fluorescens depend on diffusion rates

(2014) Steven D. Allison et al.   Frontiers in Microbiology

Historical contingency in species interactions: towards niche-based predictions

(2013) Rachel L. Vannette et al.   ECOLOGY LETTERS

Thermal acclimation in widespread heterotrophic soil microbes

(2013) Thomas W. Crowther et al.   ECOLOGY LETTERS

A meta-analysis of changes in bacterial and archaeal communities with time

(2013) Ashley Shade et al.   ISME Journal

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

Metabolic profiling reveals a functional succession of active fungi during the decay of Mediterranean plant litter

(2013) D.P. Di Lonardo et al.   SOIL BIOLOGY & BIOCHEMISTRY

A trait-based approach for modelling microbial litter decomposition

(2012) S. D. Allison   ECOLOGY LETTERS

Are functional traits and litter decomposability coordinated across leaves, twigs and wood? A test using temperate rainforest tree species

(2012) Benjamin G. Jackson et al.   OIKOS

Direct Comparisons of Illumina vs. Roche 454 Sequencing Technologies on the Same Microbial Community DNA Sample

(2012) Chengwei Luo et al.   PLoS One

Do assembly history effects attenuate from species to ecosystem properties? A field test with wood-inhabiting fungi

(2011) Ian A. Dickie et al.   ECOLOGY LETTERS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Assembly history dictates ecosystem functioning: evidence from wood decomposer communities

(2010) Tadashi Fukami et al.   ECOLOGY LETTERS

Towards modelling of decay risk of wooden materials

(2010) H. Viitanen et al.   European Journal of Wood and Wood Products

Effects of fungal endophytes on grass and non-grass litter decomposition rates

(2010) Witoon Purahong et al.   FUNGAL DIVERSITY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effects of attack of saprobic fungi on twig litter decomposition by endophytic fungi

(2009) Yu Fukasawa et al.   ECOLOGICAL RESEARCH

Plant traits and wood fates across the globe: rotted, burned, or consumed?

(2009) WILLIAM K. CORNWELL et al.   GLOBAL CHANGE BIOLOGY

Socialism in soil? The importance of mycorrhizal fungal networks for facilitation in natural ecosystems

(2009) Marcel G. A. van der Heijden et al.   JOURNAL OF ECOLOGY