Adaptive evolution and demographic history contribute to the divergent population genetic structure ofPotato virus Ybetween China and Japan

Trade-offs and evolution of thermal adaptation in the Irish potato famine pathogenPhytophthora infestans

(2016) Li-Na Yang et al.   MOLECULAR ECOLOGY

tipdatingbeast : an r package to assist the implementation of phylogenetic tip-dating tests using beast

(2016) Adrien Rieux et al.   Molecular Ecology Resources

Viruliferous rate of small brown planthopper is a good indicator of rice stripe disease epidemics

(2016) Dun-Chun He et al.   Scientific Reports

Adaptation in Natural Microbial Populations

(2015) Britt Koskella et al.   Annual Review of Ecology Evolution and Systematics

Playing on a Pathogen's Weakness: Using Evolution to Guide Sustainable Plant Disease Control Strategies

(2015) Jiasui Zhan et al.   Annual Review of Phytopathology

Seed potato production system in Japan, starting from foundation seed of potato

(2015) Tsukasa Kawakami et al.   BREEDING SCIENCE

Globally invading populations of the fungal plant pathogenVerticillium dahliaeare dominated by multiple divergent lineages

(2015) Dylan P. G. Short et al.   ENVIRONMENTAL MICROBIOLOGY

The Performance of the Date-Randomization Test in Phylogenetic Analyses of Time-Structured Virus Data

(2015) Sebastián Duchêne et al.   MOLECULAR BIOLOGY AND EVOLUTION

Population genetic analysis ofPhytophthora infestansin northwestern China

(2015) Y. E. Tian et al.   PLANT PATHOLOGY

Complete genome analysis of a novel recombinant isolate of potato virus Y from China

(2014) Fangluan Gao et al.   ARCHIVES OF VIROLOGY

Achieving sustainable plant disease management through evolutionary principles

(2014) Jiasui Zhan et al.   TRENDS IN PLANT SCIENCE

Continuous and Emerging Challenges of Potato virus Y in Potato

(2013) Alexander V. Karasev et al.   Annual Review of Phytopathology

Experimental Measures of Pathogen Competition and Relative Fitness

(2013) Jiasui Zhan et al.   Annual Review of Phytopathology

Global population structure and migration patterns suggest significant population differentiation among isolates of Pyrenophora tritici-repentis

(2013) S. Gurung et al.   FUNGAL GENETICS AND BIOLOGY

The influence ofcis-acting P1 protein and translational elements on the expression ofPotato virus Yhelper-component proteinase (HCPro) in heterologous systems and its suppression of silencing activity

(2013) Fátima Tena Fernández et al.   MOLECULAR PLANT PATHOLOGY

Potato virus Y: a major crop pathogen that has provided major insights into the evolution of viral pathogenicity

(2013) Julie Quenouille et al.   MOLECULAR PLANT PATHOLOGY

Molecular evolution and phylogeography of potato virus Y based on the CP gene

(2012) J. M. Cuevas et al.   JOURNAL OF GENERAL VIROLOGY

The Genetic Structure of Populations ofPotato virus Yin Japan; Based on the Analysis of 20 Full Genomic Sequences

(2012) Tetsuji Ogawa et al.   JOURNAL OF PHYTOPATHOLOGY

Viral Quasispecies Evolution

(2012) E. Domingo et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Bayesian Phylogenetics with BEAUti and the BEAST 1.7

(2012) Alexei J. Drummond et al.   MOLECULAR BIOLOGY AND EVOLUTION

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Crops that feed the world 8: Potato: are the trends of increased global production sustainable?

(2012) Paul R. J. Birch et al.   Food Security

Detecting Individual Sites Subject to Episodic Diversifying Selection

(2012) Ben Murrell et al.   PLoS Genetics

Potato viruses in China

(2011) Biao Wang et al.   CROP PROTECTION

Evolution in agriculture: the application of evolutionary approaches to the management of biotic interactions in agro-ecosystems

(2011) Peter H. Thrall et al.   Evolutionary Applications

Stochastic and deterministic processes interact in the assembly of desert microbial communities on a global scale

(2011) Tancredi Caruso et al.   ISME Journal

A Random Effects Branch-Site Model for Detecting Episodic Diversifying Selection

(2011) Sergei L. Kosakovsky Pond et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Potyviruses and the Digital Revolution

(2010) Adrian Gibbs et al.   Annual Review of Phytopathology

Environmental Patterns Are Imposed on the Population Structure ofEscherichia coliafter Fecal Deposition

(2010) Peter W. Bergholz et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

RDP3: a flexible and fast computer program for analyzing recombination

(2010) D. P. Martin et al.   BIOINFORMATICS

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

Food consumption trends and drivers

(2010) J. Kearney   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Genetic Diversity ofPotato virus YInfecting Tobacco Crops in China

(2010) Y. P. Tian et al.   PHYTOPATHOLOGY

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

A simple method for estimating genetic diversity in large populations from finite sample sizes

(2009) Stanislav Bashalkhanov et al.   BMC GENETICS

Positive Selection Pressure Introduces Secondary Mutations at Gag Cleavage Sites in Human Immunodeficiency Virus Type 1 Harboring Major Protease Resistance Mutations

(2009) S. Banke et al.   JOURNAL OF VIROLOGY

Potato Production and Breeding in China

(2009) S. H. Jansky et al.   POTATO RESEARCH

Pathogen evolution across the agro-ecological interface: implications for disease management

(2008) Jeremy J. Burdon et al.   Evolutionary Applications

Hantavirus Evolution in Relation to Its Rodent and Insectivore Hosts: No Evidence for Codivergence

(2008) C. Ramsden et al.   MOLECULAR BIOLOGY AND EVOLUTION

An overlapping essential gene in the Potyviridae

(2008) B. Y.-W. Chung et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phylogenetic Signal, Evolutionary Process, and Rate

(2008) Liam J. Revell et al.   SYSTEMATIC BIOLOGY

Life history determines genetic structure and evolutionary potential of host–parasite interactions

(2008) Luke G. Barrett et al.   TRENDS IN ECOLOGY & EVOLUTION

Correlating viral phenotypes with phylogeny: Accounting for phylogenetic uncertainty

(2007) Joe Parker et al.   INFECTION GENETICS AND EVOLUTION

Genetic structure of a population of Potato virus Y inducing potato tuber necrotic ringspot disease in Japan; comparison with North American and European populations

(2007) Tetsuji Ogawa et al.   VIRUS RESEARCH