Standardization procedure for plasma biomarker analysis in rat models of epileptogenesis: Focus on circulating microRNAs

Common data elements for preclinical epilepsy research: Standards for data collection and reporting. A TASK3 report of the AES/ILAE Translational Task Force of the ILAE

(2017) Lauren C. Harte-Hargrove et al.   EPILEPSIA

Common data elements and data management: Remedy to cure underpowered preclinical studies

(2017) Niina Lapinlampi et al.   EPILEPSY RESEARCH

Considerations for optimization of microRNA PCR assays for molecular diagnosis

(2016) Margaret Dellett et al.   EXPERT REVIEW OF MOLECULAR DIAGNOSTICS

Advances in the development of biomarkers for epilepsy

(2016) Asla Pitkänen et al.   LANCET NEUROLOGY

MicroRNAs in epilepsy: pathophysiology and clinical utility

(2016) David C Henshall et al.   LANCET NEUROLOGY

Toward reliable biomarker signatures in the age of liquid biopsies - how to standardize the small RNA-Seq workflow

(2016) Dominik Buschmann et al.   NUCLEIC ACIDS RESEARCH

Comparison of Methodologies to Detect Low Levels of Hemolysis in Serum for Accurate Assessment of Serum microRNAs

(2016) Jaynish S. Shah et al.   PLoS One

Assessing cellular and circulating miRNA recovery: the impact of the RNA isolation method and the quantity of input material

(2016) Victoria El-Khoury et al.   Scientific Reports

Platelets confound the measurement of extracellular miRNA in archived plasma

(2016) Adam J. Mitchell et al.   Scientific Reports

Genome-wide circulating microRNA expression profiling indicates biomarkers for epilepsy

(2015) Jun Wang et al.   Scientific Reports

MicroRNA profiles in hippocampal granule cells and plasma of rats with pilocarpine-induced epilepsy – comparison with human epileptic samples

(2015) Paolo Roncon et al.   Scientific Reports

Challenges in Using Circulating miRNAs as Cancer Biomarkers

(2015) Paola Tiberio et al.   Biomed Research International

High Throughput qPCR Expression Profiling of Circulating MicroRNAs Reveals Minimal Sex- and Sample Timing-Related Variation in Plasma of Healthy Volunteers

(2015) Catherine Mooney et al.   PLoS One

RNA-seq: impact of RNA degradation on transcript quantification

(2014) Irene Gallego Romero et al.   BMC BIOLOGY

Library preparation methods for next-generation sequencing: Tone down the bias

(2014) Erwin L. van Dijk et al.   EXPERIMENTAL CELL RESEARCH

Methodological challenges in utilizing miRNAs as circulating biomarkers

(2014) Leni Moldovan et al.   JOURNAL OF CELLULAR AND MOLECULAR MEDICINE

The challenge and promise of anti-epileptic therapy development in animal models

(2014) Michele Simonato et al.   LANCET NEUROLOGY

Optimization of Extraction of Circulating RNAs from Plasma – Enabling Small RNA Sequencing

(2014) Melanie Spornraft et al.   PLoS One

A comparison of methods for differential expression analysis of RNA-seq data

(2013) Charlotte Soneson et al.   BMC BIOINFORMATICS

Characterization of human plasma-derived exosomal RNAs by deep sequencing

(2013) Xiaoyi Huang et al.   BMC GENOMICS

Standardizing Analysis of Circulating MicroRNA: Clinical and Biological Relevance

(2013) Nicholas H. Farina et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

Quantification of Circulating miRNAs in Plasma

(2013) Ioanna S. Sourvinou et al.   JOURNAL OF MOLECULAR DIAGNOSTICS

Hippocampal subregion-specific microRNA expression during epileptogenesis in experimental temporal lobe epilepsy

(2013) Jan A. Gorter et al.   NEUROBIOLOGY OF DISEASE

Plasma Processing Conditions Substantially Influence Circulating microRNA Biomarker Levels

(2013) Heather H. Cheng et al.   PLoS One

Assessing an Improved Protocol for Plasma microRNA Extraction

(2013) Inés Moret et al.   PLoS One

Influence of Plasma Processing on Recovery and Analysis of Circulating Nucleic Acids

(2013) Karen Page et al.   PLoS One

Unbiased approach to profile the variety of small non-coding RNA of human blood plasma with massively parallel sequencing technology

(2012) Dmitry V. Semenov et al.   EXPERT OPINION ON BIOLOGICAL THERAPY

Assessing sample and miRNA profile quality in serum and plasma or other biofluids

(2012) Thorarinn Blondal et al.   METHODS

A call for transparent reporting to optimize the predictive value of preclinical research

(2012) Story C. Landis et al.   NATURE

Comparing the MicroRNA Spectrum between Serum and Plasma

(2012) Kai Wang et al.   PLoS One

Blood Cell Origin of Circulating MicroRNAs: A Cautionary Note for Cancer Biomarker Studies

(2011) C. C. Pritchard et al.   Cancer Prevention Research

Plasma Components Affect Accuracy of Circulating Cancer-Related MicroRNA Quantitation

(2011) Dong-Ja Kim et al.   JOURNAL OF MOLECULAR DIAGNOSTICS

MicroRNA history: Discovery, recent applications, and next frontiers

(2011) Maria I. Almeida et al.   MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS

Alternative splicing of mRNA in the molecular pathology of neurodegenerative diseases

(2011) James Dominic Mills et al.   NEUROBIOLOGY OF AGING

Haemolysis during Sample Preparation Alters microRNA Content of Plasma

(2011) Michaela B. Kirschner et al.   PLoS One

mRNA and microRNA quality control for RT-qPCR analysis

(2010) C. Becker et al.   METHODS

Analysis of circulating microRNA biomarkers in plasma and serum using quantitative reverse transcription-PCR (qRT-PCR)

(2010) Evan M. Kroh et al.   METHODS

RNA sequencing: advances, challenges and opportunities

(2010) Fatih Ozsolak et al.   NATURE REVIEWS GENETICS

Expression profile of microRNAs in rat hippocampus following lithium–pilocarpine-induced status epilepticus

(2010) Kai Hu et al.   NEUROSCIENCE LETTERS

What are biomarkers?

(2010) Kyle Strimbu et al.   Current Opinion in HIV and AIDS

Brain and Blood microRNA Expression Profiling of Ischemic Stroke, Intracerebral Hemorrhage, and Kainate Seizures

(2009) Da-Zhi Liu et al.   JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS