Rapid change of fecal microbiome and disappearance of Clostridium difficile in a colonized infant after transition from breast milk to cow milk

Oligosaccharides Released from Milk Glycoproteins Are Selective Growth Substrates for Infant-Associated Bifidobacteria

(2016) Sercan Karav et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diagnosis of Clostridium difficile Infections in Children

(2016) Stella Antonara et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Clinical Significance of Clostridium difficile in Children Less Than 2 Years Old

(2016) Marcela González-Del Vecchio et al.   PEDIATRIC INFECTIOUS DISEASE JOURNAL

Comparison of pediatric and adult antibiotic-associated diarrhea andClostridium difficileinfections

(2016) Lynne Vernice McFarland et al.   WORLD JOURNAL OF GASTROENTEROLOGY

Diagnostic test accuracy of glutamate dehydrogenase for Clostridium difficile: Systematic review and meta-analysis

(2016) Jun Arimoto et al.   Scientific Reports

Dynamics and Stabilization of the Human Gut Microbiome during the First Year of Life

(2015) Fredrik Bäckhed et al.   Cell Host & Microbe

Co-infection as a confounder for the role of Clostridium difficile infection in children with diarrhoea: a summary of the literature

(2015) H. de Graaf et al.   EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES

Mucin glycan foraging in the human gut microbiome

(2015) Louise E. Tailford et al.   Frontiers in Genetics

Role of the Intestinal Microbiota in Resistance to Colonization by Clostridium difficile

(2014) Robert A. Britton et al.   GASTROENTEROLOGY

Phylogenetic distribution of three pathways for propionate production within the human gut microbiota

(2014) Nicole Reichardt et al.   ISME Journal

Host adaptive immunity alters gut microbiota

(2014) Husen Zhang et al.   ISME Journal

Precision microbiome reconstitution restores bile acid mediated resistance to Clostridium difficile

(2014) Charlie G. Buffie et al.   NATURE

A Review of the Economics of Treating Clostridium difficile Infection

(2014) Kari A. Mergenhagen et al.   PHARMACOECONOMICS

Breast-fed and bottle-fed infant rhesus macaques develop distinct gut microbiotas and immune systems

(2014) A. Ardeshir et al.   Science Translational Medicine

Species and genus level resolution analysis of gut microbiota in Clostridium difficile patients following fecal microbiota transplantation

(2014) Vijay Shankar et al.   Microbiome

The correlation between Clostridium-difficile infection and human gut concentrations of Bacteroidetes phylum and clostridial species

(2013) E. Goldberg et al.   EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES

Correlation between Clostridium difficile Bacterial Load, Commercial Real-Time PCR Cycle Thresholds, and Results of Diagnostic Tests Based on Enzyme Immunoassay and Cell Culture Cytotoxicity Assay

(2013) Léa-Laurence Dionne et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Contribution of the 7β-hydroxysteroid dehydrogenase fromRuminococcus gnavusN53 to ursodeoxycholic acid formation in the human colon

(2013) Ja-Young Lee et al.   JOURNAL OF LIPID RESEARCH

Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

Diarrhea Etiology in a Pediatric Emergency Department: A Case Control Study

(2012) Donna M. Denno et al.   CLINICAL INFECTIOUS DISEASES

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Clostridium difficile prevalence rates in a large healthcare system stratified according to patient population, age, gender, and specimen consistency

(2011) J. H. Boone et al.   EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

The role of bacteria and pattern-recognition receptors in Crohn's disease

(2011) Si Ming Man et al.   Nature Reviews Gastroenterology & Hepatology

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Dysbiosis of fecal microbiota in Crohnʼs disease patients as revealed by a custom phylogenetic microarray

(2010) Seungha Kang et al.   INFLAMMATORY BOWEL DISEASES

Clostridium difficile Colonization in Early Infancy Is Accompanied by Changes in Intestinal Microbiota Composition

(2010) C. Rousseau et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Asymptomatic Colonization by Clostridium difficile in Infants: Implications for Disease in Later Life

(2010) Sushrut Jangi et al.   JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Metabolism of Bile Salts in Mice Influences Spore Germination in Clostridium difficile

(2010) Jennifer L. Giel et al.   PLoS One

Genome analysis of Bifidobacterium bifidum PRL2010 reveals metabolic pathways for host-derived glycan foraging

(2010) F. Turroni et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sialic Acid (N-Acetyl Neuraminic Acid) Utilization by Bacteroides fragilis Requires a Novel N-Acetyl Mannosamine Epimerase

(2009) C. Brigham et al.   JOURNAL OF BACTERIOLOGY

Variations in bovine milk oligosaccharides during early and middle lactation stages analyzed by high-performance liquid chromatography-chip/mass spectrometry

(2009) N. Tao et al.   JOURNAL OF DAIRY SCIENCE

Chenodeoxycholate Is an Inhibitor ofClostridium difficileSpore Germination

(2008) Joseph A. Sorg et al.   JOURNAL OF BACTERIOLOGY