4.4 Article

Comparison of thyroid hormone-dependent gene responses in vivo and in organ culture of the American bullfrog (Rana (Lithobates) catesbeiana) lung

Publisher

ELSEVIER SCIENCE INC
DOI: 10.1016/j.cbd.2015.09.001

Keywords

Frog tadpole; Lung; Thyroid hormone; Metamorphosis; Oxidative stress

Funding

  1. Natural Sciences and Engineering Council (NSERC)

Ask authors/readers for more resources

Postembiyonic frog development requires a thyroid hormone (TH)-dependent metamorphic transition from an aquatic larva to a terrestrial frog. Such change in environment involves lung maturation in preparation for breathing air. However, little is known regarding the underlying molecular events and the role of THs in this process. Using quantitative real-time polymerase chain reaction, we evaluated Rana (Lithobates) catesbeiana lung mRNA transcripts representing key elements of TH and oxidative stress signaling pathways during natural and TH-induced precocious metamorphosis. TH induction was evaluated in two ways: 1) in vivo through interperitoneal injection of 10 pmol/g body weight of 3,3',5-triiodothyronine (T3) into premetamorphic tadpoles and analysis after 48 h, and 2) in serum-free organ culture in the presence of 10 nM T3 after 48 h. Abundance of transcripts encoding the transcriptional regulators TH receptors alpha and beta, TH-induced bZip protein, and CCAAT/enhancer binding protein 1 was increased during postembryonic development and following administration of exogenous THs to premetamorphic tadpoles in vivo and culture. In contrast, mRNA representing Krtippel-like factor 9 and cold-inducible RNA binding protein revealed differential effects between natural and precocious metamorphosis. Elevated levels of catalase and Cu/Zn superoxide dismutase mRNA were observed at the end of metamorphosis with transcript levels displaying minimal TH-dependency. No change in stress-responsive heat shock protein 30 mRNA abundance was noted. The results support a role for TH-dependent reprogramming of the lung transcriptome during frog development and reveal a requirement for increased antioxidant capacity following anuran metamorphosis. (C) 2015 Elsevier Inc. All rights reserved.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.4
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Environmental Sciences

Use of electro-olfactography to measure olfactory acuity in the North American bullfrog (Lithobates (Rana) catesbeiana) tadpole

Jody L. Heerema, Caren C. Helbing, Greg G. Pyle

ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY (2018)

Article Behavioral Sciences

Behavioral and molecular analyses of olfaction-mediated avoidance responses of Rana (Lithobates) catesbeiana tadpoles: Sensitivity to thyroid hormones, estrogen, and treated municipal wastewater effluent

Jody L. Heerema, Kevin W. Jackman, Rachel C. Miliano, Linda Li, Tristan S. M. Zaborniak, Nik Veldhoen, Graham van Aggelen, Wayne J. Parker, Gregory G. Pyle, Caren C. Helbing

HORMONES AND BEHAVIOR (2018)

Article Engineering, Environmental

Evaluation of Gene Bioindicators in the Liver and Caudal Fin of Juvenile Pacific Coho Salmon in Response to Low Sulfur Marine Diesel Seawater-Accommodated Fraction Exposure

Jacob J. Imbery, Craig Buday, Rachel C. Miliano, Dayue Shang, Jessica M. Round, Honoria Kwok, Graham Van Aggelen, Caren C. Helbing

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2019)

Article Multidisciplinary Sciences

Expansion of the known distribution of the coastal tailed frog, Ascaphus truei, in British Columbia, Canada, using robust eDNA detection methods

Jared Hobbs, Jessica M. Round, Michael J. Allison, Caren C. Helbing

PLOS ONE (2019)

Article Multidisciplinary Sciences

Antimicrobial peptides from Rana [Lithobates] catesbeiana: Gene structure and bioinformatic identification of novel forms from tadpoles

Caren C. Helbing, S. Austin Hammond, Shireen H. Jackman, Simon Houston, Rene L. Warren, Caroline E. Cameron, Inanc Birol

SCIENTIFIC REPORTS (2019)

Article Environmental Sciences

Dioctyl Sodium Sulfosuccinate as a Potential Endocrine Disruptor of Thyroid Hormone Activity in American bullfrog, Rana (Lithobates) catesbeiana, Tadpoles

Lorissa M. Corrie, Meaghan N. Kempe, Oxana Blajkevitch, Dayue Shang, Caren C. Helbing

Summary: The study shows that dioctyl sodium sulfosuccinate (DOSS) can disrupt thyroid hormone (TH) signaling in American bullfrogs, affecting their developmental process. DOSS disrupted the expression of TH-responsive genes in liver and tail fin tissue of tadpoles, with different patterns of effects observed at various concentrations.

ARCHIVES OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY (2021)

Article Environmental Sciences

Sucralose Affects Thyroid Hormone Signaling in American Bullfrog [Rana (Lithobates) catesbeiana] Tadpoles

Ethan A. Abbott, Caren C. Helbing

Summary: The study found that sucralose altered the expression of fundamental thyroid hormone-response genes in premetamorphic American bullfrog tadpoles, indicating potential impacts of environmental sucralose exposure on amphibian metamorphosis. Further investigations into the cumulative effects of sucralose exposure are warranted.

ARCHIVES OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY (2021)

Article Environmental Sciences

Disruption by stealth-Interference of endocrine disrupting chemicals on hormonal crosstalk with thyroid axis function in humans and other animals

Anita A. Thambirajah, Michael G. Wade, Jonathan Verreault, Nicolas Buisine, Veronica A. Alves, Valerie S. Langlois, Caren C. Helbing

Summary: This critical review highlights the complexity of Endocrine Disrupting Chemicals interfering with Thyroid Hormone function through interactions with other hormonal axes, and emphasizes the lack of data generated in non-mammalian vertebrate classes. With the availability of more genomics-based resources, better identification and delineation of EDC effects, modes of action, and identification of effective biomarkers suitable for HPT disruption is possible. The effects of EDCs are likely to cascade into a plurality of complex physiological effects, beyond the few variables tested within research studies.

ENVIRONMENTAL RESEARCH (2022)

Article Infectious Diseases

Mining Amphibian and Insect Transcriptomes for Antimicrobial Peptide Sequences with rAMPage

Diana Lin, Darcy Sutherland, Sambina Islam Aninta, Nathan Louie, Ka Ming Nip, Chenkai Li, Anat Yanai, Lauren Coombe, Rene L. Warren, Caren C. Helbing, Linda M. N. Hoang, Inanc Birol

Summary: Antibiotic resistance is a global health crisis, and alternative antimicrobial therapeutics are urgently needed. This study presents rAMPage, a bioinformatics discovery platform, to identify AMP sequences from RNA-seq datasets. The researchers used rAMPage on 84 publicly available RNA-seq datasets, identifying 1137 possible AMPs, with 1024 deemed novel. Testing 21 selected peptide sequences, seven of them showed high antimicrobial activity.

ANTIBIOTICS-BASEL (2022)

Article Infectious Diseases

Associating Biological Activity and Predicted Structure of Antimicrobial Peptides from Amphibians and Insects

Amelia Richter, Darcy Sutherland, Hossein Ebrahimikondori, Alana Babcock, Nathan Louie, Chenkai Li, Lauren Coombe, Diana Lin, Rene L. Warren, Anat Yanai, Monica Kotkoff, Caren C. Helbing, Fraser Hof, Linda M. N. Hoang, Inanc Birol

Summary: Antimicrobial peptides (AMPs) are promising biological molecules for developing new therapeutics against antimicrobial resistance. In this study, 51 AMP candidates were bioinformatically identified and characterized. These AMPs demonstrated activity against bacterial pathogens and low toxicity to human cells. Sequence and structural analysis also predicted their antimicrobial activity.

ANTIBIOTICS-BASEL (2022)

Article Marine & Freshwater Biology

Dynamic cyp1a1 transcript responses in the caudal fin of coho salmon (Oncorhynchus kisutch) smolts to low sulfur marine diesel water accommodated fraction exposures and depuration

Anita A. Thambirajah, Rachel C. Miliano, Ethan A. Abbott, Craig Buday, Dayue Shang, Honoria Kwok, Caren C. Helbing

Summary: Oil spills in high traffic coastal environments have significant impacts on marine ecosystems and the dependent commercial and social interests. It is crucial to develop effective tools to monitor oil contamination and remediation in a timely manner due to the ongoing reliance on marine fuels. This study demonstrates the value of using the cyp1a1 transcript as a sensitive indicator for tracking exposure and recovery from oil contamination.

AQUATIC TOXICOLOGY (2023)

Article Fisheries

Establishing the Signal above the Noise: Accounting for an Environmental Background in the Detection and Quantification of Salmonid Environmental DNA

Morgan D. Hocking, Jeffrey C. MacAdams, Michael J. Allison, Lauren C. Bergman, Robert Sneiderman, Ben F. Koop, Brian M. Starzomski, Mary L. Lesperance, Caren C. Helbing

Summary: A current challenge in environmental DNA (eDNA) applications is accounting for environmental background in surveys. This study conducted two controlled experiments using a coho salmon eDNA assay, demonstrating a novel method to detect target species eDNA in the presence of background and providing a statistically robust assessment for eDNA surveys.

FISHES (2022)

Article Biology

The effect of silica desiccation under different storage conditions on filter-immobilized environmental DNA

Michael J. Allison, Jessica M. Round, Lauren C. Bergman, Ali Mirabzadeh, Heather Allen, Aron Weir, Caren C. Helbing

Summary: The study evaluated the quality of filter-immobilized eDNA desiccated with silica gel under different storage conditions for over a year using targeted quantitative real-time polymerase chain reaction (qPCR)-based assays. The results showed that silica gel outperformed ethanol preservation at preventing a decrease in eDNA sample quality at higher temperatures, and that long-term storage of eDNA filters with silica gel beads should be at -20 degrees C to maintain sample integrity.

BMC RESEARCH NOTES (2021)

Article Marine & Freshwater Biology

A multi-omic approach to elucidate low-dose effects of xenobiotics in zebrafish (Danio rerio) larvae

Susie S. Y. Huang, Jonathan P. Benskin, Nik Veldhoen, Bharat Chandramouli, Heather Butler, Caren C. Helbing, John R. Cosgrove

AQUATIC TOXICOLOGY (2017)

Article Chemistry, Analytical

A rapid gas chromatography tandem mass spectrometry method for the determination of 50 PAHs for application in a marine environment

Grace Park, Pamela Brunswick, Honoria Kwok, Maxine Haberl, Jeffrey Yan, Ceara MacInnis, Marcus Kim, Caren Helbing, Graham van Aggelen, Dayue Shang

ANALYTICAL METHODS (2018)

Article Biochemistry & Molecular Biology

Gastrointestinal dysbiosis induced by Nocardia sp. infection in tilapia

Diana Medina-Felix, Francisco Vargas-Albores, Estefania Garibay-Valdez, Luis Rafael Martinez-Cordova, Marcel Martinez-Porchas

Summary: In this research, the effects of Nocardia infection on fish gastrointestinal microbiota were analyzed. It was found that the infection led to decreased survival rate, severe damage to the stomach microbiota, and a significant increase in Proteobacteria. A negative correlation network between Proteobacteria and other important phyla was observed. Therefore, Nocardia sp. is an emerging pathogen capable of inducing dysbiosis and causing significant mortalities.

COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS (2024)

Article Biochemistry & Molecular Biology

Comparative transcriptome analysis reveals growth and molecular pathway of body color regulation in turbot (Scophthalmus maximus) exposed to different light spectrum

Lele Wu, Wen Sun, Jiale Zhou, Yaolin Li, Jun Li, Zongcheng Song, Changbin Song, Shihong Xu, Xinlu Yue, Xian Li

Summary: The study finds that red light induces dichromatic skin pigmentation in turbot juveniles, with some individuals displaying black coloration and others displaying lighter skin. The upregulated gene expressions related to melanin synthesis and the involvement of the nervous system in spectral environment-driven color regulation are both crucial factors.

COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS (2024)