Insights from the Cold Transcriptome and Metabolome of Dendrobium officinale: Global Reprogramming of Metabolic and Gene Regulation Networks during Cold Acclimation
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Insights from the Cold Transcriptome and Metabolome of Dendrobium officinale: Global Reprogramming of Metabolic and Gene Regulation Networks during Cold Acclimation
Authors
Keywords
-
Journal
Frontiers in Plant Science
Volume 7, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2016-11-08
DOI
10.3389/fpls.2016.01653
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- The Dendrobium catenatum Lindl. genome sequence provides insights into polysaccharide synthase, floral development and adaptive evolution
- (2016) Guo-Qiang Zhang et al. Scientific Reports
- Ras-GTP dimers activate the Mitogen-Activated Protein Kinase (MAPK) pathway
- (2015) Xiaolin Nan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cold responsive gene transcription becomes more complex
- (2015) Chunzhao Zhao et al. TRENDS IN PLANT SCIENCE
- Transcriptional profiling of Petunia seedlings reveals candidate regulators of the cold stress response
- (2015) Bei Li et al. Frontiers in Plant Science
- The Thylakoid Membrane Protein CGL160 Supports CF1CF0 ATP Synthase Accumulation in Arabidopsis thaliana
- (2015) Rikard Fristedt et al. PLoS One
- STRING v10: protein–protein interaction networks, integrated over the tree of life
- (2014) Damian Szklarczyk et al. NUCLEIC ACIDS RESEARCH
- Integrated Analysis of the Effects of Cold and Dehydration on Rice Metabolites, Phytohormones, and Gene Transcripts
- (2014) K. Maruyama et al. PLANT PHYSIOLOGY
- Molecular switch for cold acclimation — anatomy of the cold-inducible promoter in plants
- (2013) Yue Jiang et al. BIOCHEMISTRY-MOSCOW
- Analysis of the Dendrobium officinale transcriptome reveals putative alkaloid biosynthetic genes and genetic markers
- (2013) Xu Guo et al. GENE
- Role of CBFs as Integrators of Chloroplast Redox, Phytochrome and Plant Hormone Signaling during Cold Acclimation
- (2013) Leonid Kurepin et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Aequorin-Based Luminescence Imaging Reveals Stimulus- and Tissue-Specific Ca2+ Dynamics in Arabidopsis Plants
- (2013) Xiaohong Zhu et al. Molecular Plant
- The glutamate carboxypeptidase AMP1 mediates abscisic acid and abiotic stress responses inArabidopsis
- (2013) Yiting Shi et al. NEW PHYTOLOGIST
- Plant sugars are crucial players in the oxidative challenge during abiotic stress: extending the traditional concept
- (2013) ELS KEUNEN et al. PLANT CELL AND ENVIRONMENT
- Calcium-Dependent Protein Kinases: Hubs in Plant Stress Signaling and Development
- (2013) P. Schulz et al. PLANT PHYSIOLOGY
- Transcriptome Responses to Combinations of Stresses in Arabidopsis
- (2013) S. Rasmussen et al. PLANT PHYSIOLOGY
- Post-translational regulation of cold acclimation response
- (2013) Javier Barrero-Gil et al. PLANT SCIENCE
- Cerebroside C Increases Tolerance to Chilling Injury and Alters Lipid Composition in Wheat Roots
- (2013) Hong-Xia Li et al. PLoS One
- Development and characterization of 110 novel EST-SSR markers for Dendrobium officinale (Orchidaceae)
- (2012) Jiang-Jie Lu et al. AMERICAN JOURNAL OF BOTANY
- Review of research on Dendrobium, a prized folk medicine
- (2012) Tzi Bun Ng et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Drought, salt, and temperature stress-induced metabolic rearrangements and regulatory networks
- (2012) J. Krasensky et al. JOURNAL OF EXPERIMENTAL BOTANY
- Metabolic dynamics during autumn cold acclimation within and among populations of Sitka spruce (Picea sitchensis)
- (2012) Rebecca Dauwe et al. NEW PHYTOLOGIST
- Low-temperature perception leading to gene expression and cold tolerance in higher plants
- (2012) Marc R. Knight et al. NEW PHYTOLOGIST
- A Self-Regulatory Circuit of CIRCADIAN CLOCK-ASSOCIATED1 Underlies the Circadian Clock Regulation of Temperature Responses inArabidopsis
- (2012) Pil Joon Seo et al. PLANT CELL
- Physiological and molecular changes in plants grown at low temperatures
- (2012) Andreas Theocharis et al. PLANTA
- MINE: Module Identification in Networks
- (2011) Kahn Rhrissorrakrai et al. BMC BIOINFORMATICS
- Identification of Cis-Acting Promoter Elements in Cold- and Dehydration-Induced Transcriptional Pathways in Arabidopsis, Rice, and Soybean
- (2011) K. Maruyama et al. DNA RESEARCH
- Cold acclimation in the moss Physcomitrella patens involves abscisic acid-dependent signaling
- (2011) Salma Begum Bhyan et al. JOURNAL OF PLANT PHYSIOLOGY
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases
- (2011) Chen Xie et al. NUCLEIC ACIDS RESEARCH
- Recommendations for Reporting Metabolite Data
- (2011) A. R. Fernie et al. PLANT CELL
- Coping with Stresses: Roles of Calcium- and Calcium/Calmodulin-Regulated Gene Expression
- (2011) Anireddy S.N. Reddy et al. PLANT CELL
- Selective Inhibition of Clade A Phosphatases Type 2C by PYR/PYL/RCAR Abscisic Acid Receptors
- (2011) R. Antoni et al. PLANT PHYSIOLOGY
- The chloroplast ribosomal protein L21 gene is essential for plastid development and embryogenesis in Arabidopsis
- (2011) Tuanzhang Yin et al. PLANTA
- Structural basis for basal activity and autoactivation of abscisic acid (ABA) signaling SnRK2 kinases
- (2011) L.-M. Ng et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Molecular Mimicry Regulates ABA Signaling by SnRK2 Kinases and PP2C Phosphatases
- (2011) F.-F. Soon et al. SCIENCE
- Mitogen-Activated Protein Kinase Signaling in Plants
- (2010) Maria Cristina et al. Annual Review of Plant Biology
- Cytoscape 2.8: new features for data integration and network visualization
- (2010) M. E. Smoot et al. BIOINFORMATICS
- Molecular Basis of Plant Cold Acclimation: Insights Gained from Studying the CBF Cold Response Pathway
- (2010) M. F. Thomashow PLANT PHYSIOLOGY
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- PlnTFDB: updated content and new features of the plant transcription factor database
- (2009) Paulino Pérez-Rodríguez et al. NUCLEIC ACIDS RESEARCH
- Web-based resources for mass-spectrometry-based metabolomics: A user’s guide
- (2009) Takayuki Tohge et al. PHYTOCHEMISTRY
- Cold stress and acclimation - what is important for metabolic adjustment?
- (2009) A. Janská et al. PLANT BIOLOGY
- The Phytochrome-Interacting Factor PIF7 Negatively Regulates DREB1 Expression under Circadian Control in Arabidopsis
- (2009) S. Kidokoro et al. PLANT PHYSIOLOGY
- Proline: a multifunctional amino acid
- (2009) László Szabados et al. TRENDS IN PLANT SCIENCE
- Mapping and quantifying mammalian transcriptomes by RNA-Seq
- (2008) Ali Mortazavi et al. NATURE METHODS
- High-throughput functional annotation and data mining with the Blast2GO suite
- (2008) S. Gotz et al. NUCLEIC ACIDS RESEARCH
- Multilevel genomic analysis of the response of transcripts, enzyme activities and metabolites in Arabidopsis rosettes to a progressive decrease of temperature in the non-freezing range
- (2008) BJÖRN USADEL et al. PLANT CELL AND ENVIRONMENT
- Galactinol and Raffinose Constitute a Novel Function to Protect Plants from Oxidative Damage
- (2008) A. Nishizawa et al. PLANT PHYSIOLOGY
- Gene expression in potato during cold exposure: Changes in carbohydrate and polyamine metabolisms
- (2008) Mouhssin Oufir et al. PLANT SCIENCE
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now