Using Transcriptomics to Identify Differential Gene Expression in Response to Salinity among Australian Phragmites australis Clones

Genetic and epigenetic differences associated with environmental gradients in replicate populations of two salt marsh perennials

(2016) C. M. Foust et al.   MOLECULAR ECOLOGY

Advancing the science of microbial symbiosis to support invasive species management: a case study on Phragmites in the Great Lakes

(2015) Kurt P. Kowalski et al.   Frontiers in Microbiology

Expression of major photosynthetic and salt-resistance genes in invasive reed lineages grown under elevated CO2and temperature

(2014) Franziska Eller et al.   Ecology and Evolution

Shifts in diversity and community structure of endophytic bacteria and archaea across root, stem and leaf tissues in the common reed, Phragmites australis, along a salinity gradient in a marine tidal wetland of northern China

(2013) Bin Ma et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Physiological responses ofPhragmites australisto the combined effects of water and salinity stress

(2013) Zhifeng Yang et al.   Ecohydrology

Transcriptome Comparative Profiling of Barley eibi1 Mutant Reveals Pleiotropic Effects of HvABCG31 Gene on Cuticle Biogenesis and Stress Responsive Pathways

(2013) Zujun Yang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Differences in salinity tolerance of genetically distinct Phragmites australis clones

(2013) Luciana Achenbach et al.   AoB Plants

Different genotypes of Phragmites australis show distinct phenotypic plasticity in response to nutrient availability and temperature

(2012) Franziska Eller et al.   AQUATIC BOTANY

Invasion of diverse habitats by few Japanese knotweed genotypes is correlated with epigenetic differentiation

(2012) Christina L. Richards et al.   ECOLOGY LETTERS

Spatial Genetic Structure in Natural Populations of Phragmites australis in a Mosaic of Saline Habitats in the Yellow River Delta, China

(2012) Lexuan Gao et al.   PLoS One

Phenotypic traits of Phragmites australis clones are not related to ploidy level and distribution range

(2012) Luciana Achenbach et al.   AoB Plants

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Influence of NaCl-salinity on growth, photosynthesis, water relations and solute accumulation in Phragmites australis

(2010) Mustapha Gorai et al.   ACTA PHYSIOLOGIAE PLANTARUM

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Mechanisms of Salinity Tolerance

(2008) Rana Munns et al.   Annual Review of Plant Biology

Osmotic and ionic effects of NaCl and Na2SO4 salinity on Phragmites australis

(2008) Majken Pagter et al.   AQUATIC BOTANY

Isolation and characterization of plasma membrane Na+/H+ antiporter genes from salt-sensitive and salt-tolerant reed plants

(2008) Ryuichi Takahashi et al.   JOURNAL OF PLANT PHYSIOLOGY

Salt tolerance of barley induced by the root endophytePiriformospora indicais associated with a strong increase in antioxidants

(2008) Helmut Baltruschat et al.   NEW PHYTOLOGIST

Genetic diversity patterns in Phragmites australis at the population, regional and continental scales

(2007) Carla Lambertini et al.   AQUATIC BOTANY