Whole Genome Sequencing of Enterovirus species C Isolates by High-Throughput Sequencing: Development of Generic Primers

Comparison of Next-Generation Sequencing Technologies for Comprehensive Assessment of Full-Length Hepatitis C Viral Genomes

(2016) Emma Thomson et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Targeted full-genome amplification and sequencing of dengue virus types 1–4 from South America

(2016) Cristopher D. Cruz et al.   JOURNAL OF VIROLOGICAL METHODS

Library construction for next-generation sequencing: Overviews and challenges

(2016) Steven R. Head et al.   BIOTECHNIQUES

Within-host nucleotide diversity of virus populations: Insights from next-generation sequencing

(2015) Chase W. Nelson et al.   INFECTION GENETICS AND EVOLUTION

Rapid next-generation sequencing of dengue, EV-A71 and RSV-A viruses

(2015) Cécile Baronti et al.   JOURNAL OF VIROLOGICAL METHODS

Preferential Amplification of Pathogenic Sequences

(2015) Fang Ge et al.   Scientific Reports

Library preparation methods for next-generation sequencing: Tone down the bias

(2014) Erwin L. van Dijk et al.   EXPERIMENTAL CELL RESEARCH

Deep sequencing: Becoming a critical tool in clinical virology

(2014) Miguel E. Quiñones-Mateu et al.   JOURNAL OF CLINICAL VIROLOGY

Complete coding regions of the prototypes enterovirus B93 and C95: Phylogenetic analyses of the P1 and P3 regions of EV-B and EV-C strains

(2014) N. Junttila et al.   JOURNAL OF MEDICAL VIROLOGY

Recombination among human non-polio enteroviruses: implications for epidemiology and evolution

(2014) Zaharoula Kyriakopoulou et al.   VIRUS GENES

Non-random DNA fragmentation in next-generation sequencing

(2014) Maria S. Poptsova et al.   Scientific Reports

Genomic analysis of coxsackieviruses A1, A19, A22, enteroviruses 113 and 104: viruses representing two clades with distinct tropism within enterovirus C

(2013) R. Tokarz et al.   JOURNAL OF GENERAL VIROLOGY

Evaluation of rapid and simple techniques for the enrichment of viruses prior to metagenomic virus discovery

(2013) Richard J. Hall et al.   JOURNAL OF VIROLOGICAL METHODS

The Origin of Biased Sequence Depth in Sequence-Independent Nucleic Acid Amplification and Optimization for Efficient Massive Parallel Sequencing

(2013) Toon Rosseel et al.   PLoS One

Picornavirus and enterovirus diversity with associated human diseases

(2012) Caroline Tapparel et al.   INFECTION GENETICS AND EVOLUTION

High Frequency and Diversity of Species C Enteroviruses in Cameroon and Neighboring Countries

(2012) Serge Alain Sadeuh-Mba et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Genetic Relationship between Cocirculating Human Enteroviruses Species C

(2011) Maël Bessaud et al.   PLoS One

Recombination between Poliovirus and Coxsackie A Viruses of Species C: A Model of Viral Genetic Plasticity and Emergence

(2011) Nicolas Combelas et al.   Viruses-Basel

Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries

(2011) Daniel Aird et al.   GENOME BIOLOGY

Beyond the Consensus: Dissecting Within-Host Viral Population Diversity of Foot-and-Mouth Disease Virus by Using Next-Generation Genome Sequencing

(2010) C. F. Wright et al.   JOURNAL OF VIROLOGY

Mechanisms of genetic variation in polioviruses

(2010) Carita Savolainen-Kopra et al.   REVIEWS IN MEDICAL VIROLOGY

Viral genome sequencing by random priming methods

(2008) Appolinaire Djikeng et al.   BMC GENOMICS

Phi29 polymerase based random amplification of viral RNA as an alternative to random RT-PCR

(2008) Nicolas Berthet et al.   BMC MOLECULAR BIOLOGY

Characterization of the genome of human enteroviruses: Design of generic primers for amplification and sequencing of different regions of the viral genome

(2008) Maël Bessaud et al.   JOURNAL OF VIROLOGICAL METHODS

The cis-acting replication elements define human enterovirus and rhinovirus species

(2008) S. Cordey et al.   RNA