Host-Specific Functional Significance of Caenorhabditis Gut Commensals

The native microbiome of the nematode Caenorhabditis elegans: gateway to a new host-microbiome model

(2016) Philipp Dirksen et al.   BMC BIOLOGY

Genetic Determinants of the Gut Microbiome in UK Twins

(2016) Julia K. Goodrich et al.   Cell Host & Microbe

Assembly of the Caenorhabditis elegans gut microbiota from diverse soil microbial environments

(2016) Maureen Berg et al.   ISME Journal

Antimicrobial effectors in the nematodeCaenorhabditis elegans: an outgroup to the Arthropoda

(2016) Katja Dierking et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Caenorhabditis elegansresponses to bacteria from its natural habitats

(2016) Buck S. Samuel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cospeciation of gut microbiota with hominids

(2016) A. H. Moeller et al.   SCIENCE

Gut Microbiotas and Host Evolution: Scaling Up Symbiosis

(2016) Michael Shapira   TRENDS IN ECOLOGY & EVOLUTION

The Gut Microbiota of Termites: Digesting the Diversity in the Light of Ecology and Evolution

(2015) Andreas Brune et al.   Annual Review of Microbiology

Microbiota-Modulated Metabolites Shape the Intestinal Microenvironment by Regulating NLRP6 Inflammasome Signaling

(2015) Maayan Levy et al.   CELL

Control of Brain Development, Function, and Behavior by the Microbiome

(2015) Timothy R. Sampson et al.   Cell Host & Microbe

Diet Dominates Host Genotype in Shaping the Murine Gut Microbiota

(2015) Rachel N. Carmody et al.   Cell Host & Microbe

Host Biology in Light of the Microbiome: Ten Principles of Holobionts and Hologenomes

(2015) Seth R. Bordenstein et al.   PLOS BIOLOGY

C. elegans outside the Petri dish

(2015) Lise Frézal et al.   eLife

Primer and platform effects on 16S rRNA tag sequencing

(2015) Julien Tremblay et al.   Frontiers in Microbiology

Genomics of the honey bee microbiome

(2015) Nancy A Moran   Current Opinion in Insect Science

Human Genetics Shape the Gut Microbiome

(2014) Julia K. Goodrich et al.   CELL

Water fleas require microbiota for survival, growth and reproduction

(2014) Marilou P Sison-Mangus et al.   ISME Journal

Identifying the core microbial community in the gut of fungus-growing termites

(2014) Saria Otani et al.   MOLECULAR ECOLOGY

Rapid changes in the gut microbiome during human evolution

(2014) Andrew H. Moeller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Behavioral avoidance of pathogenic bacteria by Caenorhabditis elegans

(2014) Joshua D. Meisel et al.   TRENDS IN IMMUNOLOGY

Bacterial Nitric Oxide Extends the Lifespan of C. elegans

(2013) Ivan Gusarov et al.   CELL

Microbiological Survey of the Human Gastric Ecosystem Using Culturing and Pyrosequencing Methods

(2013) Susana Delgado et al.   MICROBIAL ECOLOGY

Taxonomic evaluation of the genus Enterobacter based on multilocus sequence analysis (MLSA): Proposal to reclassify E. nimipressuralis and E. amnigenus into Lelliottia gen. nov. as Lelliottia nimipressuralis comb. nov. and Lelliottia amnigena comb. nov., respectively, E. gergoviae and E. pyrinus into Pluralibacter gen. nov. as Pluralibacter gergoviae comb. nov. and Pluralibacter pyrinus comb. nov., respectively, E. cowanii, E. radicincitans, E. oryzae and E. arachidis into Kosakonia gen. nov. as Kosakonia cowanii comb. nov., Kosakonia radicincitans comb. nov., Kosakonia oryzae comb. nov. and Kosakonia arachidis comb. nov., respectively, and E. turicensis, E. helveticus and E. pulveris into Cronobacter as Cronobacter zurichensis nom. nov., Cronobacter helveticus comb. nov. and Cronobacter pulveris comb. nov., respectively, and emended description of the genera Enterobacter and Cronobacter

(2013) Carrie Brady et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

An age-dependent reversal in the protective capacities of JNK signaling shortens Caenorhabditis elegans lifespan

(2012) Kwame Twumasi-Boateng et al.   AGING CELL

Gut Immune Maturation Depends on Colonization with a Host-Specific Microbiota

(2012) Hachung Chung et al.   CELL

Association with Soil Bacteria Enhances p38-Dependent Infection Resistance in Caenorhabditis elegans

(2012) Sirena Montalvo-Katz et al.   INFECTION AND IMMUNITY

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Human gut microbiome viewed across age and geography

(2012) Tanya Yatsunenko et al.   NATURE

Genetic and molecular analysis of nematode-microbe interactions

(2011) Man-Wah Tan et al.   CELLULAR MICROBIOLOGY

THE ROLES OF HOST EVOLUTIONARY RELATIONSHIPS (GENUS: NASONIA) AND DEVELOPMENT IN STRUCTURING MICROBIAL COMMUNITIES

(2011) Robert M. Brucker et al.   EVOLUTION

Drosophila Microbiome Modulates Host Developmental and Metabolic Homeostasis via Insulin Signaling

(2011) S. C. Shin et al.   SCIENCE

The Evolution of Host Specialization in the Vertebrate Gut Symbiont Lactobacillus reuteri

(2011) Steven A. Frese et al.   PLoS Genetics

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Associations between species and groups of sites: indices and statistical inference

(2009) Miquel De Cáceres et al.   ECOLOGY

Isolation of naturally associated bacteria of necromenic Pristionchus nematodes and fitness consequences

(2008) R. Rae et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Genomic Diversity within the Enterobacter cloacae Complex

(2008) Armand Paauw et al.   PLoS One