Microbial Mat Compositional and Functional Sensitivity to Environmental Disturbance

Anaerobic Growth of Haloarchaeon Haloferax volcanii by Denitrification Is Controlled by the Transcription Regulator NarO

(2016) Tatsuya Hattori et al.   JOURNAL OF BACTERIOLOGY

Seasonal Succession Leads to Habitat-Dependent Differentiation in Ribosomal RNA:DNA Ratios among Freshwater Lake Bacteria

(2016) Vincent J. Denef et al.   Frontiers in Microbiology

Patterns and Determinants of Halophilic Archaea (Class Halobacteria) Diversity in Tunisian Endorheic Salt Lakes and Sebkhet Systems

(2015) Afef Najjari et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Coupling of diversification and pH adaptation during the evolution of terrestrial Thaumarchaeota

(2015) Cécile Gubry-Rangin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

High dissolved organic carbon release by benthic cyanobacterial mats in a Caribbean reef ecosystem

(2015) Hannah J. Brocke et al.   Scientific Reports

Drivers of the dynamics of diazotrophs and denitrifiers in North Sea bottom waters and sediments

(2015) Haoxin Fan et al.   Frontiers in Microbiology

Resuscitation of the rare biosphere contributes to pulses of ecosystem activity

(2015) Zachary T. Aanderud et al.   Frontiers in Microbiology

Response of the rare biosphere to environmental stressors in a highly diverse ecosystem (Zodletone spring, OK, USA)

(2015) Suzanne Coveley et al.   PeerJ

Interactions between anaerobic ammonium and sulfur-oxidizing bacteria in a laboratory scale model system

(2014) Lina Russ et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial diversity and biogeochemical cycling in soda lakes

(2014) Dimitry Y. Sorokin et al.   EXTREMOPHILES

Sulfate reduction and sulfide oxidation in extremely steep salinity gradients formed by freshwater springs emerging into the Dead Sea

(2014) Stefan Häusler et al.   FEMS MICROBIOLOGY ECOLOGY

Microbial ecology of an Antarctic hypersaline lake: genomic assessment of ecophysiology among dominant haloarchaea

(2014) Timothy J Williams et al.   ISME Journal

Revisiting N2 fixation in Guerrero Negro intertidal microbial mats with a functional single-cell approach

(2014) Dagmar Woebken et al.   ISME Journal

Salinity and Bacterial Diversity: To What Extent Does the Concentration of Salt Affect the Bacterial Community in a Saline Soil?

(2014) Loredana Canfora et al.   PLoS One

Connecting the dots: linking nitrogen cycle gene expression to nitrogen fluxes in marine sediment mesocosms

(2014) Jennifer L. Bowen et al.   Frontiers in Microbiology

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Controls on Nitrogen Loss Processes in Chesapeake Bay Sediments

(2013) Andrew R. Babbin et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Evaluating rRNA as an indicator of microbial activity in environmental communities: limitations and uses

(2013) Steven J Blazewicz et al.   ISME Journal

Phylogenetic Analysis of a Microbialite-Forming Microbial Mat from a Hypersaline Lake of the Kiritimati Atoll, Central Pacific

(2013) Dominik Schneider et al.   PLoS One

New insights into the archaeal diversity of a hypersaline microbial mat obtained by a metagenomic approach

(2013) A. López-López et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

amoA-encoding archaea and thaumarchaeol in the lakes on the northeastern Qinghai-Tibetan Plateau, China

(2013) Jian Yang et al.   Frontiers in Microbiology

Patterns of microbial diversity along a salinity gradient in the Guerrero Negro solar saltern, Baja CA Sur, Mexico

(2013) Jesse G. Dillon et al.   Frontiers in Microbiology

Physiology and Diversity of Ammonia-Oxidizing Archaea

(2012) David A. Stahl et al.   Annual Review of Microbiology

Spatial and seasonal prokaryotic community dynamics in ponds of increasing salinity of Sfax solar saltern in Tunisia

(2012) Ines Boujelben et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Evidence for Niche Partitioning Revealed by the Distribution of Sulfur Oxidation Genes Collected from Areas of a Terrestrial Sulfidic Spring with Differing Geochemical Conditions

(2012) Brendan Headd et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

“Methanoplasmatales,” Thermoplasmatales-Related Archaea in Termite Guts and Other Environments, Are the Seventh Order of Methanogens

(2012) Kristina Paul et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Electrosynthesis of Commodity Chemicals by an Autotrophic Microbial Community

(2012) Christopher W. Marshall et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effect of salinity on nitrogenase activity and composition of the active diazotrophic community in intertidal microbial mats

(2012) Ina Severin et al.   ARCHIVES OF MICROBIOLOGY

Sulfur metabolism in archaea reveals novel processes

(2012) Yuchen Liu et al.   ENVIRONMENTAL MICROBIOLOGY

Biogeography of bacterial communities exposed to progressive long-term environmental change

(2012) Ramiro Logares et al.   ISME Journal

Gene Expression Correlates with Process Rates Quantified for Sulfate- and Fe(III)-Reducing Bacteria in U(VI)-Contaminated Sediments

(2012) Denise M. Akob et al.   Frontiers in Microbiology

Nitrogenase (nifH) gene expression in diazotrophic cyanobacteria in the Tropical North Atlantic in response to nutrient amendments

(2012) Kendra A. Turk-Kubo et al.   Frontiers in Microbiology

Environmental Controls on Nitrogen and Sulfur Cycles in Surficial Aquatic Sediments

(2012) Chuanhui Gu et al.   Frontiers in Microbiology

Fundamentals of Microbial Community Resistance and Resilience

(2012) Ashley Shade et al.   Frontiers in Microbiology

Phylogenetic Diversities and Community Structure of Members of the Extremely Halophilic Archaea (Order Halobacteriales) in Multiple Saline Sediment Habitats

(2011) Noha H. Youssef et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology

(2011) Michael Pester et al.   CURRENT OPINION IN MICROBIOLOGY

Resistance, resilience and recovery: aquatic bacterial dynamics after water column disturbance

(2011) Ashley Shade et al.   ENVIRONMENTAL MICROBIOLOGY

Predicting microbial nitrogen pathways from basic principles

(2011) Ingrid A. van de Leemput et al.   ENVIRONMENTAL MICROBIOLOGY

Characterization of heterotrophic prokaryote subgroups in the Sfax coastal solar salterns by combining flow cytometry cell sorting and phylogenetic analysis

(2011) Hana Trigui et al.   EXTREMOPHILES

Microbial seed banks: the ecological and evolutionary implications of dormancy

(2011) Jay T. Lennon et al.   NATURE REVIEWS MICROBIOLOGY

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Structural and functional responses of microbial mats to reductions in nutrient and salinity stressors in a Bahamian hypersaline lagoon

(2010) JL Pinckney et al.   AQUATIC MICROBIAL ECOLOGY

Thermodynamic limits to microbial life at high salt concentrations

(2010) Aharon Oren   ENVIRONMENTAL MICROBIOLOGY

Ecological and evolutionary factors underlying global and local assembly of denitrifier communities

(2010) Christopher M Jones et al.   ISME Journal

A ‘rare biosphere’ microorganism contributes to sulfate reduction in a peatland

(2010) Michael Pester et al.   ISME Journal

Determinants of the distribution of nitrogen-cycling microbial communities at the landscape scale

(2010) D Bru et al.   ISME Journal

Taking Root: Enduring Effect of Rhizosphere Bacterial Colonization in Mangroves

(2010) Newton C. M. Gomes et al.   PLoS One

Global declines in oceanic nitrification rates as a consequence of ocean acidification

(2010) J. M. Beman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dormancy contributes to the maintenance of microbial diversity

(2010) S. E. Jones et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Abundance of Ammonia-Oxidizing Archaea and Bacteria along an Estuarine Salinity Gradient in Relation to Potential Nitrification Rates

(2009) A. E. Bernhard et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Bacterial, archaeal and eukaryotic diversity of smooth and pustular microbial mat communities in the hypersaline lagoon of Shark Bay

(2009) M. A. ALLEN et al.   Geobiology

Relationship between N-cycling communities and ecosystem functioning in a 50-year-old fertilization experiment

(2009) Sara Hallin et al.   ISME Journal

Global ecological patterns in uncultured Archaea

(2009) Jean-Christophe Auguet et al.   ISME Journal

Genetic and Functional Variation in Denitrifier Populations along a Short-Term Restoration Chronosequence

(2008) J. M. Smith et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Flat laminated microbial mat communities

(2008) Jonathan Franks et al.   EARTH-SCIENCE REVIEWS

Disturbance-driven changes in the variability of ecological patterns and processes

(2008) Jennifer M. Fraterrigo et al.   ECOLOGY LETTERS

Regulation of nif gene expression and the energetics of N2 fixation over the diel cycle in a hot spring microbial mat

(2008) Anne-Soisig Steunou et al.   ISME Journal

A salinity and sulfate manipulation of hypersaline microbial mats reveals stasis in the cyanobacterial community structure

(2008) Stefan J Green et al.   ISME Journal

Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota

(2008) Céline Brochier-Armanet et al.   NATURE REVIEWS MICROBIOLOGY

Resistance, resilience, and redundancy in microbial communities

(2008) S. D. Allison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Microbial Engines That Drive Earth's Biogeochemical Cycles

(2008) P. G. Falkowski et al.   SCIENCE