The composition and organization of Drosophila heterochromatin are heterogeneous and dynamic

The Pentameric Nucleoplasmin Fold Is Present in Drosophila FKBP39 and a Large Number of Chromatin-Related Proteins

(2015) Christian Edlich-Muth et al.   JOURNAL OF MOLECULAR BIOLOGY

The ImageJ ecosystem: An open platform for biomedical image analysis

(2015) Johannes Schindelin et al.   MOLECULAR REPRODUCTION AND DEVELOPMENT

2016 update of the PRIDE database and its related tools

(2015) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

Heterochromatin-associated interactions of Drosophila HP1a with dADD1, HIPP1, and repetitive RNAs

(2014) A. A. Alekseyenko et al.   GENES & DEVELOPMENT

Analysis of the heterochromatin protein 1 (HP1) interactome in Drosophila

(2014) Hyun-Wook Ryu et al.   Journal of Proteomics

Diversity and dynamics of the Drosophila transcriptome

(2014) James B. Brown et al.   NATURE

DNA Copy-Number Control through Inhibition of Replication Fork Progression

(2014) Jared T. Nordman et al.   Cell Reports

The Oct1 homolog Nubbin is a repressor of NF-κB-dependent immune gene expression that increases the tolerance to gut microbiota

(2013) Widad Dantoft et al.   BMC BIOLOGY

A Pair of Centromeric Proteins Mediates Reproductive Isolation in Drosophila Species

(2013) Andreas W. Thomae et al.   DEVELOPMENTAL CELL

The Nucleoplasmin Homolog NLP Mediates Centromere Clustering and Anchoring to the Nucleolus

(2013) Jan Padeken et al.   MOLECULAR CELL

A Network Model of the Molecular Organization of Chromatin in Drosophila

(2013) Joke G. van Bemmel et al.   MOLECULAR CELL

The Genetic Makeup of the Drosophila piRNA Pathway

(2013) Dominik Handler et al.   MOLECULAR CELL

The CRAPome: a contaminant repository for affinity purification–mass spectrometry data

(2013) Dattatreya Mellacheruvu et al.   NATURE METHODS

HP1a, Su(var)3-9, SETDB1 and POF stimulate or repress gene expression depending on genomic position, gene length and expression pattern in Drosophila melanogaster

(2013) Lina E. Lundberg et al.   NUCLEIC ACIDS RESEARCH

Quantitating the Specificity and Selectivity of Gcn5-Mediated Acetylation of Histone H3

(2013) Yin-Ming Kuo et al.   PLoS One

Stepwise Evolution of Essential Centromere Function in a Drosophila Neogene

(2013) B. D. Ross et al.   SCIENCE

Drosophila H1 Regulates the Genetic Activity of Heterochromatin by Recruitment of Su(var)3-9

(2013) X. Lu et al.   SCIENCE

Position-Effect Variegation, Heterochromatin Formation, and Gene Silencing in Drosophila

(2013) S. C. R. Elgin et al.   Cold Spring Harbor Perspectives in Biology

RNA editing regulates transposon-mediated heterochromatic gene silencing

(2013) Yiannis A. Savva et al.   Nature Communications

Transcriptional Silencing of Transposons by Piwi and Maelstrom and Its Impact on Chromatin State and Gene Expression

(2012) Grzegorz Sienski et al.   CELL

Nuclear Aggregation of Olfactory Receptor Genes Governs Their Monogenic Expression

(2012) E. Josephine Clowney et al.   CELL

Epigenetic Silencing of Core Histone Genes by HERS in Drosophila

(2012) Saya Ito et al.   MOLECULAR CELL

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

A Role for the CAL1-Partner Modulo in Centromere Integrity and Accurate Chromosome Segregation in Drosophila

(2012) Chin-Chi Chen et al.   PLoS One

Analysis of the human HP1 interactome reveals novel binding partners

(2011) Claire Rosnoblet et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Double-Strand Breaks in Heterochromatin Move Outside of a Dynamic HP1a Domain to Complete Recombinational Repair

(2011) Irene Chiolo et al.   CELL

Inheritance of Stress-Induced, ATF-2-Dependent Epigenetic Change

(2011) Ki-Hyeon Seong et al.   CELL

A Protein Complex Network of Drosophila melanogaster

(2011) K.G. Guruharsha et al.   CELL

The HP1a Disordered C Terminus and Chromo Shadow Domain Cooperate to Select Target Peptide Partners

(2011) Deanna L. Mendez et al.   CHEMBIOCHEM

The Bin3 RNA methyltransferase is required for repression of caudal translation in the Drosophila embryo

(2011) Navjot Singh et al.   DEVELOPMENTAL BIOLOGY

Chromodomain-Mediated Oligomerization of HP1 Suggests a Nucleosome-Bridging Mechanism for Heterochromatin Assembly

(2011) Daniele Canzio et al.   MOLECULAR CELL

The RNA Helicase Rm62 Cooperates with SU(VAR)3-9 to Re-Silence Active Transcription in Drosophila melanogaster

(2011) Joern Boeke et al.   PLoS One

Blanks, a nuclear siRNA/dsRNA-binding complex component, is required for Drosophila spermiogenesis

(2011) V. R. Gerbasi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functions and Regulation of RNA Editing by ADAR Deaminases

(2010) Kazuko Nishikura   Annual Review of Biochemistry

Hdac3 Is Essential for the Maintenance of Chromatin Structure and Genome Stability

(2010) Srividya Bhaskara et al.   CANCER CELL

The winged-helix transcription factor JUMU regulates development, nucleolus morphology and function, and chromatin organization of Drosophila melanogaster

(2010) Annemarie Hofmann et al.   CHROMOSOME RESEARCH

Proneural and abdominal Hox inputs synergize to promote sensory organ formation in the Drosophila abdomen

(2010) Lisa M. Gutzwiller et al.   DEVELOPMENTAL BIOLOGY

Protein Complex of Drosophila ATRX/XNP and HP1a Is Required for the Formation of Pericentric Beta-heterochromatinin Vivo

(2010) Alexander V. Emelyanov et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Human POGZ modulates dissociation of HP1α from mitotic chromosome arms through Aurora B activation

(2010) Ryu-Suke Nozawa et al.   NATURE CELL BIOLOGY

Conformational Spread as a Mechanism for Cooperativity in the Bacterial Flagellar Switch

(2010) F. Bai et al.   SCIENCE

Perturbation Analysis of Heterochromatin-Mediated Gene Silencing and Somatic Inheritance

(2010) Jonathan I. Schneiderman et al.   PLoS Genetics

Multiscale Analysis of Dynamics and Interactions of Heterochromatin Protein 1 by Fluorescence Fluctuation Microscopy

(2009) Katharina P. Müller et al.   BIOPHYSICAL JOURNAL

Drosophila HNF4 Regulates Lipid Mobilization and β-Oxidation

(2009) Laura Palanker et al.   Cell Metabolism

The winged-helix transcription factor JUMU is a haplo-suppressor/triplo-enhancer of PEV in various tissues but exhibits reverse PEV effects in the brain of Drosophila melanogaster

(2009) Annemarie Hofmann et al.   CHROMOSOME RESEARCH

Umbrea, a chromo shadow domain protein in Drosophila melanogaster heterochromatin, interacts with Hip, HP1 and HOAP

(2009) Christian Joppich et al.   CHROMOSOME RESEARCH

Drosophila ptip is essential for anterior/posterior patterning in development and interacts with the PcG and trxG pathways

(2009) M. Fang et al.   DEVELOPMENT

A novel histone fold domain-containing protein that replaces TAF6 in Drosophila SAGA is required for SAGA-dependent gene expression

(2009) V. M. Weake et al.   GENES & DEVELOPMENT

Coordinated Regulation of Heterochromatic Genes in Drosophila melanogaster Males

(2009) X. Deng et al.   GENETICS

Heterochromatin Protein 1 Is Extensively Decorated with Histone Code-like Post-translational Modifications

(2009) Gary LeRoy et al.   MOLECULAR & CELLULAR PROTEOMICS

Loss of YY1 Impacts the Heterochromatic State and Meiotic Double-Strand Breaks during Mouse Spermatogenesis

(2009) S. Wu et al.   MOLECULAR AND CELLULAR BIOLOGY

Statistical methods for analysis of high-throughput RNA interference screens

(2009) Amanda Birmingham et al.   NATURE METHODS

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

The XNP remodeler targets dynamic chromatin in Drosophila

(2009) J. I. Schneiderman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Drosophila modigliani (moi) gene encodes a HOAP-interacting protein required for telomere protection

(2009) G. D. Raffa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Scoring diverse cellular morphologies in image-based screens with iterative feedback and machine learning

(2009) Thouis R. Jones et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Heterochromatic Genome Stability Requires Regulators of Histone H3 K9 Methylation

(2009) Jamy C. Peng et al.   PLoS Genetics

Heterochromatin Protein 1 (HP1a) Positively Regulates Euchromatic Gene Expression through RNA Transcript Association and Interaction with hnRNPs in Drosophila

(2009) Lucia Piacentini et al.   PLoS Genetics

The Ecdysone-inducible zinc-finger transcription factor Crol regulates Wg transcription and cell cycle progression in Drosophila

(2008) N. Mitchell et al.   DEVELOPMENT

Functioning of the Drosophila Wilms'-Tumor-1-Associated Protein Homolog, Fl(2)d, in Sex-Lethal-Dependent Alternative Splicing

(2008) J. K. M. Penn et al.   GENETICS

HP1-β is required for development of the cerebral neocortex and neuromuscular junctions

(2008) Rebecca Aucott et al.   JOURNAL OF CELL BIOLOGY

Interaction between the Drosophila heterochromatin proteins SUUR and HP1

(2008) A. V. Pindyurin et al.   JOURNAL OF CELL SCIENCE

The Human SPT20-Containing SAGA Complex Plays a Direct Role in the Regulation of Endoplasmic Reticulum Stress-Induced Genes

(2008) Z. Nagy et al.   MOLECULAR AND CELLULAR BIOLOGY

Heterochromatin Protein 1a Stimulates Histone H3 Lysine 36 Demethylation by the Drosophila KDM4A Demethylase

(2008) Chia-Hui Lin et al.   MOLECULAR CELL

HP1 Proteins Form Distinct Complexes and Mediate Heterochromatic Gene Silencing by Nonoverlapping Mechanisms

(2008) Mohammad R. Motamedi et al.   MOLECULAR CELL

Comparative Analysis of Argonaute-Dependent Small RNA Pathways in Drosophila

(2008) Rui Zhou et al.   MOLECULAR CELL

The HP1–p150/CAF-1 interaction is required for pericentric heterochromatin replication and S-phase progression in mouse cells

(2008) Jean-Pierre Quivy et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH

The Chromatin Remodelling Factor dATRX Is Involved in Heterochromatin Formation

(2008) Andrew R. Bassett et al.   PLoS One

Telomeric Position Effect—A Third Silencing Mechanism in Eukaryotes

(2008) J. Greg Doheny et al.   PLoS One