Enhancer regions show high histone H3.3 turnover that changes during differentiation
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Title
Enhancer regions show high histone H3.3 turnover that changes during differentiation
Authors
Keywords
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Journal
eLife
Volume 5, Issue -, Pages -
Publisher
eLife Sciences Organisation, Ltd.
Online
2016-06-16
DOI
10.7554/elife.15316
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Note: Only part of the references are listed.- MNase titration reveals differences between nucleosome occupancy and chromatin accessibility
- (2016) Jakub Mieczkowski et al. Nature Communications
- Pioneer Transcription Factors Target Partial DNA Motifs on Nucleosomes to Initiate Reprogramming
- (2015) Abdenour Soufi et al. CELL
- The E3 ubiquitin ligase activity of RING1B is not essential for early mouse development
- (2015) Robert S. Illingworth et al. GENES & DEVELOPMENT
- Genome-wide analysis of H3.3 dissociation reveals high nucleosome turnover at distal regulatory regions of embryonic stem cells
- (2015) Misook Ha et al. Epigenetics & Chromatin
- Two distinct promoter architectures centered on dynamic nucleosomes control ribosomal protein gene transcription
- (2014) Britta Knight et al. GENES & DEVELOPMENT
- Every amino acid matters: essential contributions of histone variants to mammalian development and disease
- (2014) Ian Maze et al. NATURE REVIEWS GENETICS
- Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution
- (2014) J. Vierstra et al. SCIENCE
- Nucleosomal occupancy changes locally over key regulatory regions during cell differentiation and reprogramming
- (2014) Jason A. West et al. Nature Communications
- A System for Genome-Wide Histone Variant Dynamics In ES Cells Reveals Dynamic MacroH2A2 Replacement at Promoters
- (2014) Ozlem Yildirim et al. PLoS Genetics
- GAT: a simulation framework for testing the association of genomic intervals
- (2013) A. Heger et al. BIOINFORMATICS
- Multiplexed Illumina sequencing libraries from picogram quantities of DNA
- (2013) Sarah K Bowman et al. BMC GENOMICS
- Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes
- (2013) Warren A. Whyte et al. CELL
- Substrates for Improved Live-Cell Fluorescence Labeling of SNAP-tag
- (2013) Ivan Correa et al. CURRENT PHARMACEUTICAL DESIGN
- Histone variants in pluripotency and disease
- (2013) P. J. Skene et al. DEVELOPMENT
- Assembly in G1 phase and long-term stability are unique intrinsic features of CENP-A nucleosomes
- (2013) Dani L. Bodor et al. MOLECULAR BIOLOGY OF THE CELL
- Occupying Chromatin: Polycomb Mechanisms for Getting to Genomic Targets, Stopping Transcriptional Traffic, and Staying Put
- (2013) Jeffrey A. Simon et al. MOLECULAR CELL
- Polycomb-Dependent H3K27me1 and H3K27me2 Regulate Active Transcription and Enhancer Fidelity
- (2013) Karin J. Ferrari et al. MOLECULAR CELL
- Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
- (2013) Jason D Buenrostro et al. NATURE METHODS
- Genome-wide incorporation dynamics reveal distinct categories of turnover for the histone variant H3.3
- (2013) Daniel C Kraushaar et al. GENOME BIOLOGY
- Histone Variant H2A.Bbd Is Associated with Active Transcription and mRNA Processing in Human Cells
- (2012) Michael Y. Tolstorukov et al. MOLECULAR CELL
- Differential analysis of gene regulation at transcript resolution with RNA-seq
- (2012) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- RNA Polymerase II Pausing Downstream of Core Histone Genes Is Different from Genes Producing Polyadenylated Transcripts
- (2012) Krishanpal Anamika et al. PLoS One
- Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome
- (2012) Sahar Abubucker et al. PLoS Computational Biology
- Nucleosome fragility reveals novel functional states of chromatin and poises genes for activation
- (2011) Y. Xi et al. GENOME RESEARCH
- Dynamics of Histone H3 Deposition In Vivo Reveal a Nucleosome Gap-Filling Mechanism for H3.3 to Maintain Chromatin Integrity
- (2011) Dominique Ray-Gallet et al. MOLECULAR CELL
- Inducible Cassette Exchange: A Rapid and Efficient System Enabling Conditional Gene Expression in Embryonic Stem and Primary Cells
- (2011) Michelina Iacovino et al. STEM CELLS
- Distinct Factors Control Histone Variant H3.3 Localization at Specific Genomic Regions
- (2010) Aaron D. Goldberg et al. CELL
- c-Myc Regulates Transcriptional Pause Release
- (2010) Peter B. Rahl et al. CELL
- Widespread transcription at neuronal activity-regulated enhancers
- (2010) Tae-Kyung Kim et al. NATURE
- A unique chromatin signature uncovers early developmental enhancers in humans
- (2010) Alvaro Rada-Iglesias et al. NATURE
- Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
- (2010) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- Genome-Wide Kinetics of Nucleosome Turnover Determined by Metabolic Labeling of Histones
- (2010) R. B. Deal et al. SCIENCE
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- HJURP Is a Cell-Cycle-Dependent Maintenance and Deposition Factor of CENP-A at Centromeres
- (2009) Elaine M. Dunleavy et al. CELL
- Centromere-Specific Assembly of CENP-A Nucleosomes Is Mediated by HJURP
- (2009) Daniel R. Foltz et al. CELL
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- Nascent RNA Sequencing Reveals Widespread Pausing and Divergent Initiation at Human Promoters
- (2008) Leighton J. Core et al. SCIENCE
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