Population genomics reveals the origin and asexual evolution of human infective trypanosomes

Allele Sharing and Evidence for Sexuality in a Mitochondrial Clade of Bdelloid Rotifers

(2015) Ana Signorovitch et al.   GENETICS

Allele Sharing and Evidence for Sexuality in a Mitochondrial Clade of Bdelloid Rotifers

(2015) Ana Signorovitch et al.   GENETICS

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Meiosis and Haploid Gametes in the Pathogen Trypanosoma brucei

(2014) Lori Peacock et al.   CURRENT BIOLOGY

Comparative Genomics Reveals Multiple Genetic Backgrounds of Human Pathogenicity in the Trypanosoma brucei Complex

(2014) Mark Sistrom et al.   Genome Biology and Evolution

Reproductive clonality in protozoan pathogens-truth or artefact?

(2014) Juan David Ramírez et al.   MOLECULAR ECOLOGY

Mechanism of Trypanosoma brucei gambiense resistance to human serum

(2013) Pierrick Uzureau et al.   NATURE

Human and Animal Trypanosomes in Côte d'Ivoire Form a Single Breeding Population

(2013) Paul Capewell et al.   PLoS One

Population-genomic insights into the evolutionary origin and fate of obligately asexual Daphnia pulex

(2013) A. E. Tucker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Whole-Genome Sequencing of Trypanosoma brucei Reveals Introgression between Subspecies That Is Associated with Virulence

(2013) I. Goodhead et al.   mBio

Population Genetics of Trypanosoma brucei rhodesiense: Clonality and Diversity within and between Foci

(2013) Craig W. Duffy et al.   PLoS Neglected Tropical Diseases

The TgsGP Gene Is Essential for Resistance to Human Serum in Trypanosoma brucei gambiense

(2013) Paul Capewell et al.   PLoS Pathogens

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

(2012) H. Thorvaldsdottir et al.   BRIEFINGS IN BIOINFORMATICS

Improved whole-chromosome phasing for disease and population genetic studies

(2012) Olivier Delaneau et al.   NATURE METHODS

Reproductive clonality of pathogens: A perspective on pathogenic viruses, bacteria, fungi, and parasitic protozoa

(2012) M. Tibayrenc et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular Evidence for Ancient Asexuality in Timema Stick Insects

(2011) Tanja Schwander et al.   CURRENT BIOLOGY

Mapping copy number variation by population-scale genome sequencing

(2011) Ryan E. Mills et al.   NATURE

A linear complexity phasing method for thousands of genomes

(2011) Olivier Delaneau et al.   NATURE METHODS

Differences between Trypanosoma brucei gambiense Groups 1 and 2 in Their Resistance to Killing by Trypanolytic Factor 1

(2011) Paul Capewell et al.   PLoS Neglected Tropical Diseases

Recent, Independent and Anthropogenic Origins of Trypanosoma cruzi Hybrids

(2011) Michael D. Lewis et al.   PLoS Neglected Tropical Diseases

Jane: a new tool for the cophylogeny reconstruction problem

(2010) Chris Conow et al.   Algorithms for Molecular Biology

The Atlas of human African trypanosomiasis: a contribution to global mapping of neglected tropical diseases

(2010) Pere P Simarro et al.   International Journal of Health Geographics

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Signs of sex: what we know and how we know it

(2009) Andrew M. Schurko et al.   TRENDS IN ECOLOGY & EVOLUTION

Trypanosoma brucei gambiense Type 1 populations from human patients are clonal and display geographical genetic differentiation

(2008) Liam J. Morrison et al.   INFECTION GENETICS AND EVOLUTION

Evidence for degenerate tetraploidy in bdelloid rotifers

(2008) David B. Mark Welch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Population genetics of Trypanosoma brucei gambiense, the agent of sleeping sickness in Western Africa

(2008) M. Koffi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Parasexual Cycle in Candida albicans Provides an Alternative Pathway to Meiosis for the Formation of Recombinant Strains

(2008) Anja Forche et al.   PLOS BIOLOGY

Genetic analysis of the human infective trypanosome Trypanosoma brucei gambiense: chromosomal segregation, crossing over, and the construction of a genetic map

(2008) Anneli Cooper et al.   GENOME BIOLOGY