Dynamics of Bacterial Community Abundance and Structure in Horizontal Subsurface Flow Wetland Mesocosms Treating Municipal Wastewater

Effects of nitrogen removal microbes and partial nitrification-denitrification in the integrated vertical-flow constructed wetland

(2016) Guiping Fu et al.   ECOLOGICAL ENGINEERING

Diversity is the question, not the answer

(2016) Ashley Shade   ISME Journal

Bacterial community dynamics in surface flow constructed wetlands for the treatment of swine waste

(2016) A.M. Ibekwe et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Pathways regulating the removal of nitrogen in planted and unplanted subsurface flow constructed wetlands

(2016) Nikolaos V. Paranychianakis et al.   WATER RESEARCH

Microbial abundance and community in subsurface flow constructed wetland microcosms: role of plant presence

(2015) Qian Wang et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

The activated sludge ecosystem contains a core community of abundant organisms

(2015) Aaron M Saunders et al.   ISME Journal

Expanded metabolic versatility of ubiquitous nitrite-oxidizing bacteria from the genusNitrospira

(2015) Hanna Koch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nitrogen transforming community in a horizontal subsurface-flow constructed wetland

(2015) Oksana Coban et al.   WATER RESEARCH

Ammonia-oxidizing microbial communities in reactors with efficient nitrification at low-dissolved oxygen

(2015) Colin M. Fitzgerald et al.   WATER RESEARCH

Microbial density and diversity in constructed wetland systems and the relation to pollutant removal efficiency

(2015) Y. Zhang et al.   WATER SCIENCE AND TECHNOLOGY

Regulation of dissolved oxygen from accumulated nitrite during the heterotrophic nitrification and aerobic denitrification of Pseudomonas stutzeri T13

(2014) Yilu Sun et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Nutrient removal and microbial communities' development in a young unplanted constructed wetland using Bauxsol™ pellets to treat wastewater

(2014) Laure M. Despland et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Support vector regression model of wastewater bioreactor performance using microbial community diversity indices: Effect of stress and bioaugmentation

(2014) Hari Seshan et al.   WATER RESEARCH

Microbial communities from different types of natural wastewater treatment systems: Vertical and horizontal flow constructed wetlands and biofilters

(2014) B. Adrados et al.   WATER RESEARCH

Correction: Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing

(2014) Susan M. Huse et al.   PLoS Genetics

Bacterial structure and spatiotemporal distribution in a horizontal subsurface flow constructed wetland

(2013) Moez Bouali et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Characterisation of the soil bacterial community structure and composition of natural and constructed wetlands

(2013) Gemma Ansola et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Comparison of the Levels of Bacterial Diversity in Freshwater, Intertidal Wetland, and Marine Sediments by Using Millions of Illumina Tags

(2012) Yu Wang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pyrosequencing Analysis of Bacterial Diversity in 14 Wastewater Treatment Systems in China

(2012) Xiaohui Wang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Denitrification and aerobic respiration, hybrid electron transport chains and co-evolution

(2012) Jianwei Chen et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Microbial community structures in different wastewater treatment plants as revealed by 454-pyrosequencing analysis

(2012) Man Hu et al.   BIORESOURCE TECHNOLOGY

Molecular ecological network analyses

(2012) Ye Deng et al.   BMC BIOINFORMATICS

Spatial distribution of N-cycling microbial communities showed complex patterns in constructed wetland sediments

(2012) David Correa-Galeote et al.   FEMS MICROBIOLOGY ECOLOGY

Evaluation of quantitative real-time PCR workflow modifications on 16S rRNA and tetA gene quantification in environmental samples

(2012) Hiie Nõlvak et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Characterization of soil bacterial community structure and physicochemical properties in created and natural wetlands

(2012) Rita M. Peralta et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Clustering 16S rRNA for OTU prediction: a method of unsupervised Bayesian clustering

(2011) Xiaolin Hao et al.   BIOINFORMATICS

Impact of training sets on classification of high-throughput bacterial 16s rRNA gene surveys

(2011) Jeffrey J Werner et al.   ISME Journal

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

454 Pyrosequencing reveals bacterial diversity of activated sludge from 14 sewage treatment plants

(2011) Tong Zhang et al.   ISME Journal

Microbial community structure stability, a key parameter in monitoring the development of constructed wetland mesocosms during start-up

(2011) Jean-Baptiste Ramond et al.   RESEARCH IN MICROBIOLOGY

Genetic potential for N2O emissions from the sediment of a free water surface constructed wetland

(2011) Arantzazu García-Lledó et al.   WATER RESEARCH

Picante: R tools for integrating phylogenies and ecology

(2010) S. W. Kembel et al.   BIOINFORMATICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Enhanced denitrification in a bioaugmented horizontal subsurface flow filter

(2010) Igor Zaytsev et al.   ECOLOGICAL ENGINEERING

Long-term performance of constructed wetlands with horizontal sub-surface flow: Ten case studies from the Czech Republic

(2010) Jan Vymazal   ECOLOGICAL ENGINEERING

Dynamics in the bacterial community-level physiological profiles and hydrological characteristics of constructed wetland mesocosms during start-up

(2010) Kela P. Weber et al.   ECOLOGICAL ENGINEERING

Bacterial Community Structure in Geographically Distributed Biological Wastewater Treatment Reactors

(2010) Siqing Xia et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

A review of molecular methods to study the microbiota of soil and the mycosphere

(2010) J.D. van Elsas et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Denitrification rates and community structure of denitrifying bacteria in newly constructed wetland

(2010) Keunyea Song et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Ecological and evolutionary factors underlying global and local assembly of denitrifier communities

(2010) Christopher M Jones et al.   ISME Journal

V-Xtractor: An open-source, high-throughput software tool to identify and extract hypervariable regions of small subunit (16S/18S) ribosomal RNA gene sequences

(2010) Martin Hartmann et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Multivariate Cutoff Level Analysis (MultiCoLA) of large community data sets

(2010) Angélique Gobet et al.   NUCLEIC ACIDS RESEARCH

Deep Sequencing of the Vaginal Microbiota of Women with HIV

(2010) Ruben Hummelen et al.   PLoS One

Unlocking Short Read Sequencing for Metagenomics

(2010) Sébastien Rodrigue et al.   PLoS One

Microbiome Profiling by Illumina Sequencing of Combinatorial Sequence-Tagged PCR Products

(2010) Gregory B. Gloor et al.   PLoS One

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Constructed Wetlands for Wastewater Treatment

(2010) Jan Vymazal   Water

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Treatment of industrial wastewater with two-stage constructed wetlands planted with Typha latifolia and Phragmites australis

(2009) Cristina S.C. Calheiros et al.   BIORESOURCE TECHNOLOGY

Comparison of horizontal and vertical constructed wetland systems for landfill leachate treatment

(2009) Arda Yalcuk et al.   BIORESOURCE TECHNOLOGY

Bioaugmentation in a newly established LECA-based horizontal flow soil filter reduces the adaptation period and enhances denitrification

(2009) Kaspar Nurk et al.   BIORESOURCE TECHNOLOGY

Methanogenic population dynamics assessed by real-time quantitative PCR in sludge granule in upflow anaerobic sludge blanket treating swine wastewater

(2009) Minkyung Song et al.   BIORESOURCE TECHNOLOGY

BARCRAWL and BARTAB: software tools for the design and implementation of barcoded primers for highly multiplexed DNA sequencing

(2009) Daniel N Frank   BMC BIOINFORMATICS

Substrate effect on bacterial communities from constructed wetlands planted with Typha latifolia treating industrial wastewater

(2009) Cristina S.C. Calheiros et al.   ECOLOGICAL ENGINEERING

Microbial processes influencing performance of treatment wetlands: A review

(2009) Jennifer L. Faulwetter et al.   ECOLOGICAL ENGINEERING

Abundance of denitrifying genes coding for nitrate (narG), nitrite (nirS), and nitrous oxide (nosZ) reductases in estuarine versus wastewater effluent-fed constructed wetlands

(2009) Kyongmi Chon et al.   ECOLOGICAL ENGINEERING

Diversity and population structure of sewage-derived microorganisms in wastewater treatment plant influent

(2009) S. L. McLellan et al.   ENVIRONMENTAL MICROBIOLOGY

Comparative analysis of the composition of bacterial communities from two constructed wetlands for municipal and swine wastewater treatment

(2009) Paula Arroyo et al.   JOURNAL OF WATER AND HEALTH

Microbial Population and Activity in Wetland Microcosms Constructed for Improving Treated Municipal Wastewater

(2009) Lilach Iasur-Kruh et al.   MICROBIAL ECOLOGY

Amplification efficiency: linking baseline and bias in the analysis of quantitative PCR data

(2009) J. M. Ruijter et al.   NUCLEIC ACIDS RESEARCH

Microbial biomass, activity and community composition in constructed wetlands

(2009) Marika Truu et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Removal of nitrogen in constructed wetlands with horizontal sub-sureface flow: a review

(2009) Jan Vymazal et al.   WETLANDS

Phylogenetic Analysis of Nitrite, Nitric Oxide, and Nitrous Oxide Respiratory Enzymes Reveal a Complex Evolutionary History for Denitrification

(2008) Christopher M. Jones et al.   MOLECULAR BIOLOGY AND EVOLUTION