Human Management of a Wild Plant Modulates the Evolutionary Dynamics of a Gene Determining Recessive Resistance to Virus Infection

A TILLING approach to generate broad-spectrum resistance to potyviruses in tomato is hampered byeIF4Egene redundancy

(2016) Camille Gauffier et al.   PLANT JOURNAL

Durable Resistance of Crops to Disease: A Darwinian Perspective

(2015) James K.M. Brown   Annual Review of Phytopathology

The I-TASSER Suite: protein structure and function prediction

(2015) Jianyi Yang et al.   NATURE METHODS

Plant domestication through an ecological lens

(2015) Rubén Milla et al.   TRENDS IN ECOLOGY & EVOLUTION

Ecosystem simplification, biodiversity loss and plant virus emergence

(2015) Marilyn J Roossinck et al.   Current Opinion in Virology

Identifying the Molecular Basis of Host-Parasite Coevolution: Merging Models and Mechanisms

(2014) Mark F. Dybdahl et al.   AMERICAN NATURALIST

Genomic variability as a driver of plant–pathogen coevolution?

(2014) Talia L Karasov et al.   CURRENT OPINION IN PLANT BIOLOGY

Interaction Patterns between Potato Virus Y and eIF4E-Mediated Recessive Resistance in the Solanaceae

(2014) B. Moury et al.   JOURNAL OF VIROLOGY

Geographical Gradient of the eIF4E Alleles Conferring Resistance to Potyviruses in Pea (Pisum) Germplasm

(2014) Eva Konečná et al.   PLoS One

Multiple lines of evidence for the origin of domesticated chili pepper, Capsicum annuum, in Mexico

(2014) K. H. Kraft et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Achieving sustainable plant disease management through evolutionary principles

(2014) Jiasui Zhan et al.   TRENDS IN PLANT SCIENCE

Dominant resistance against plant viruses

(2014) Dryas de Ronde et al.   Frontiers in Plant Science

Genotyping a large collection of pepper (Capsicum spp.) with SSR loci brings new evidence for the wild origin of cultivated C. annuum and the structuring of genetic diversity by human selection of cultivar types

(2013) Maryse Nicolaï et al.   GENETIC RESOURCES AND CROP EVOLUTION

Evolution of plant eukaryotic initiation factor 4E (eIF4E) and potyvirus genome-linked protein (VPg): A game of mirrors impacting resistance spectrum and durability

(2013) B. Moury et al.   INFECTION GENETICS AND EVOLUTION

FUBAR: A Fast, Unconstrained Bayesian AppRoximation for Inferring Selection

(2013) B. Murrell et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Landscape heterogeneity shapes host-parasite interactions and results in apparent plant-virus codivergence

(2013) M. Rodelo-Urrego et al.   MOLECULAR ECOLOGY

Potato virus Y: a major crop pathogen that has provided major insights into the evolution of viral pathogenicity

(2013) Julie Quenouille et al.   MOLECULAR PLANT PATHOLOGY

Trade-offs in host range evolution of plant viruses

(2013) F. García-Arenal et al.   PLANT PATHOLOGY

Fitness costs and trade-offs of disease resistance and their consequences for breeding arable crops

(2013) J. K. M. Brown et al.   PLANT PATHOLOGY

An Atypical Kinase under Balancing Selection Confers Broad-Spectrum Disease Resistance in Arabidopsis

(2013) Carine Huard-Chauveau et al.   PLoS Genetics

AN EXPERIMENTAL TEST OF THE TRANSMISSION-VIRULENCE TRADE-OFF HYPOTHESIS IN A PLANT VIRUS

(2012) Juliette Doumayrou et al.   EVOLUTION

THE ORIGIN OF SPECIFICITY BY MEANS OF NATURAL SELECTION: EVOLVED AND NONHOST RESISTANCE IN HOST-PATHOGEN INTERACTIONS

(2012) Janis Antonovics et al.   EVOLUTION

Balancing Selection at the Tomato RCR3 Guardee Gene Family Maintains Variation in Strength of Pathogen Defense

(2012) Anja C. Hörger et al.   PLoS Genetics

Effect of Biodiversity Changes in Disease Risk: Exploring Disease Emergence in a Plant-Virus System

(2012) Israel Pagán et al.   PLoS Pathogens

Modelling the Evolutionary Dynamics of Viruses within Their Hosts: A Case Study Using High-Throughput Sequencing

(2012) Frédéric Fabre et al.   PLoS Pathogens

Plant-Parasite Coevolution: Bridging the Gap between Genetics and Ecology

(2011) James K. M. Brown et al.   Annual Review of Phytopathology

Structural Insights into the Allosteric Effects of 4EBP1 on the Eukaryotic Translation Initiation Factor eIF4E

(2011) Nadeem Siddiqui et al.   JOURNAL OF MOLECULAR BIOLOGY

Impact of Human Management on the Genetic Variation of Wild Pepper, Capsicum annuum var. glabriusculum

(2011) Pablo González-Jara et al.   PLoS One

EcoTILLING in Capsicum species: searching for new virus resistances

(2010) Vicente P Ibiza et al.   BMC GENOMICS

Direct Interaction Between theRice yellow mottle virus(RYMV) VPg and the Central Domain of the Rice eIF(iso)4G1 Factor Correlates with Rice Susceptibility and RYMV Virulence

(2010) Eugénie Hébrard et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

I-TASSER: a unified platform for automated protein structure and function prediction

(2010) Ambrish Roy et al.   Nature Protocols

Genetic perspectives on crop domestication

(2010) Briana L. Gross et al.   TRENDS IN PLANT SCIENCE

The Coevolution of Virulence: Tolerance in Perspective

(2010) Tom J. Little et al.   PLoS Pathogens

Crystallization and preliminary X-ray analysis of eukaryotic initiation factor 4E fromPisum sativum

(2009) Jamie A. Ashby et al.   Acta Crystallographica Section F-Structural Biology and Crystallization Communications

Genetic diversity and structure in semiwild and domesticated chiles (Capsicum annuum; Solanaceae) from Mexico

(2009) A. Aguilar-Melendez et al.   AMERICAN JOURNAL OF BOTANY

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Domestication and plant genomes

(2009) Haibao Tang et al.   CURRENT OPINION IN PLANT BIOLOGY

Allele mining in the pepper gene pool provided new complementation effects between pvr2-eIF4E and pvr6-eIF(iso)4E alleles for resistance to pepper veinal mottle virus

(2009) M. Rubio et al.   JOURNAL OF GENERAL VIROLOGY

WhyRice yellow mottle virus, a rapidly evolving RNA plant virus, is not efficient at breakingrymv1-2resistance

(2009) NILS POULICARD et al.   MOLECULAR PLANT PATHOLOGY

Double mutations in eIF4E and eIFiso4E confer recessive resistance to Chilli veinal mottle virus in pepper

(2009) JeeNa Hwang et al.   MOLECULES AND CELLS

A novel pair of universal primers for the detection of potyviruses

(2009) L. Zheng et al.   PLANT PATHOLOGY

The Origins of Plant Pathogens in Agro-Ecosystems

(2008) Eva H. Stukenbrock et al.   Annual Review of Phytopathology

I-TASSER server for protein 3D structure prediction

(2008) Yang Zhang   BMC BIOINFORMATICS

jModelTest: Phylogenetic Model Averaging

(2008) D. Posada   MOLECULAR BIOLOGY AND EVOLUTION

The evolution of virulence and pathogenicity in plant pathogen populations

(2008) SOLEDAD SACRISTÁN et al.   MOLECULAR PLANT PATHOLOGY

Immune defence, parasite evasion strategies and their relevance for 'macroscopic phenomena' such as virulence

(2008) P. Schmid-Hempel   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Natural variation and functional analyses provide evidence for co-evolution between plant eIF4E and potyviral VPg

(2008) Carine Charron et al.   PLANT JOURNAL