- Home
- Publications
- Publication Search
- Publication Details
Title
Metabarcoding of fungal communities associated with bark beetles
Authors
Keywords
-
Journal
Ecology and Evolution
Volume 6, Issue 6, Pages 1590-1600
Publisher
Wiley
Online
2016-02-13
DOI
10.1002/ece3.1925
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Highly diversified fungi are associated with the achlorophyllous orchid Gastrodia flavilabella
- (2015) Tsunglin Liu et al. BMC GENOMICS
- Scraping the bottom of the barrel: are rare high throughput sequences artifacts?
- (2015) Shawn P. Brown et al. Fungal Ecology
- One fungus, which genes? Development and assessment of universal primers for potential secondary fungal DNA barcodes
- (2015) J.B. Stielow et al. PERSOONIA
- Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi
- (2015) Leho Tedersoo et al. MycoKeys
- Can DNA-Based Ecosystem Assessments Quantify Species Abundance? Testing Primer Bias and Biomass—Sequence Relationships with an Innovative Metabarcoding Protocol
- (2015) Vasco Elbrecht et al. PLoS One
- Evaluating Bias of Illumina-Based Bacterial 16S rRNA Gene Profiles
- (2014) Katherine Kennedy et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
- (2014) Susannah J Salter et al. BMC BIOLOGY
- Clustering of fungal community internal transcribed spacer sequence data obscures taxonomic diversity
- (2014) Naomichi Yamamoto et al. ENVIRONMENTAL MICROBIOLOGY
- The ambrosia symbiosis is specific in some species and promiscuous in others: evidence from community pyrosequencing
- (2014) Martin Kostovcik et al. ISME Journal
- Multigene phylogenies of Ophiostomataceae associated with Monterey pine bark beetles in Spain reveal three new fungal species
- (2014) Pedro Romón et al. MYCOLOGIA
- Comparison and Validation of Some ITS Primer Pairs Useful for Fungal Metabarcoding Studies
- (2014) Michiel Op De Beeck et al. PLoS One
- Global diversity and geography of soil fungi
- (2014) L. Tedersoo et al. SCIENCE
- An Illumina metabarcoding pipeline for fungi
- (2014) Miklós Bálint et al. Ecology and Evolution
- The Bark Beetle Holobiont: Why Microbes Matter
- (2013) Diana L. Six JOURNAL OF CHEMICAL ECOLOGY
- Vector Affinity and Diversity of Geosmithia Fungi Living on Subcortical Insects Inhabiting Pinaceae Species in Central and Northeastern Europe
- (2013) Miroslav Kolařík et al. MICROBIAL ECOLOGY
- Destructive Tree Diseases Associated with Ambrosia and Bark Beetles: Black Swan Events in Tree Pathology?
- (2013) Randy C. Ploetz et al. PLANT DISEASE
- The Diversity and Distribution of Fungi on Residential Surfaces
- (2013) Rachel I. Adams et al. PLoS One
- Illumina metabarcoding of a soil fungal community
- (2013) Philipp-André Schmidt et al. SOIL BIOLOGY & BIOCHEMISTRY
- Global species numbers of fungi: are tropical studies and molecular approaches contributing to a more robust estimate?
- (2012) D. L. Hawksworth BIODIVERSITY AND CONSERVATION
- Comparison of ITS1 and ITS2 rDNA in 454 sequencing of hyperdiverse fungal communities
- (2012) Anna L. Bazzicalupo et al. Fungal Ecology
- Characterization of fungal communities associated with the bark beetle Ips typographus varies depending on detection method, location, and beetle population levels
- (2012) Luana Giordano et al. MYCOLOGICAL PROGRESS
- Not All Sequence Tags Are Created Equal: Designing and Validating Sequence Identification Tags Robust to Indels
- (2012) Brant C. Faircloth et al. PLoS One
- Limits of nuclear ribosomal DNA internal transcribed spacer (ITS) sequences as species barcodes for Fungi
- (2012) L. Kiss PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi
- (2012) C. L. Schoch et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring
- (2012) Douglas W. Yu et al. Methods in Ecology and Evolution
- Barcoded Primers Used in Multiplex Amplicon Pyrosequencing Bias Amplification
- (2011) David Berry et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- UCHIME improves sensitivity and speed of chimera detection
- (2011) Robert C. Edgar et al. BIOINFORMATICS
- Quality control and preprocessing of metagenomic datasets
- (2011) R. Schmieder et al. BIOINFORMATICS
- Integrative analysis of environmental sequences using MEGAN4
- (2011) D. H. Huson et al. GENOME RESEARCH
- Reproducibility and quantitation of amplicon sequencing-based detection
- (2011) Jizhong Zhou et al. ISME Journal
- Illumina-based analysis of microbial community diversity
- (2011) Patrick H Degnan et al. ISME Journal
- The sudden emergence of pathogenicity in insect-fungus symbioses threatens naive forest ecosystems
- (2011) J. Hulcr et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Microbiome Profiling by Illumina Sequencing of Combinatorial Sequence-Tagged PCR Products
- (2010) Gregory B. Gloor et al. PLoS One
- Bark beetles and pinhole borers (Curculionidae, Scolytinae, Platypodinae) alien to Europe
- (2010) Lawrence Kirkendall et al. ZooKeys
- Increasing ecological inference from high throughput sequencing of fungi in the environment through a tagging approach
- (2008) D. LEE TAYLOR et al. Molecular Ecology Resources
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search