Methanogen Diversity in Indigenous and Introduced Ruminant Species on the Tibetan Plateau

Phylogenomic Data Support a Seventh Order of Methylotrophic Methanogens and Provide Insights into the Evolution of Methanogenesis

(2013) Guillaume Borrel et al.   Genome Biology and Evolution

Candidatus Methanogranum caenicola: a Novel Methanogen from the Anaerobic Digested Sludge, and Proposal of Methanomassiliicoccaceae fam. nov. and Methanomassiliicoccales ord. nov., for a Methanogenic Lineage of the Class Thermoplasmata

(2013) Takao Iino et al.   MICROBES AND ENVIRONMENTS

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Methylotrophic methanogenic Thermoplasmata implicated in reduced methane emissions from bovine rumen

(2013) Morten Poulsen et al.   Nature Communications

Diversity of gut methanogens in herbivorous animals

(2012) B. St-Pierre et al.   Animal

Changes of chemical composition to high altitude results in Kobresia littledalei growing in alpine meadows with high feeding values for herbivores

(2012) X.S. Guo et al.   ANIMAL FEED SCIENCE AND TECHNOLOGY

“Methanoplasmatales,” Thermoplasmatales-Related Archaea in Termite Guts and Other Environments, Are the Seventh Order of Methanogens

(2012) Kristina Paul et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Comparative Survey of Rumen Microbial Communities and Metabolites across One Caprine and Three Bovine Groups, Using Bar-Coded Pyrosequencing and1H Nuclear Magnetic Resonance Spectroscopy

(2012) Hyo Jung Lee et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Comparison of methanogen diversity of yak (Bos grunniens) and cattle (Bos taurus) from the Qinghai-Tibetan plateau, China

(2012) Xiao Huang et al.   BMC MICROBIOLOGY

Structures of free-living and protozoa-associated methanogen communities in the bovine rumen differ according to comparative analysis of 16S rRNA and mcrA genes

(2012) L. D. Tymensen et al.   MICROBIOLOGY-SGM

Fast, accurate error-correction of amplicon pyrosequences using Acacia

(2012) Lauren Bragg et al.   NATURE METHODS

Nitrogen metabolism and recycling in yaks (Bos grunniens) offered a forage - concentrate diet differing in N concentration

(2012) X. S. Guo et al.   Animal Production Science

Analysis of methanogenic archaeal communities of rumen fluid and rumen particles from Korean black goats

(2011) Min-Jung GU et al.   ANIMAL SCIENCE JOURNAL

Strategy for Modular Tagged High-Throughput Amplicon Sequencing

(2011) Daniel Aguirre de Cárcer et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Methanogen community structure in the rumens of farmed sheep, cattle and red deer fed different diets

(2011) Jeyamalar Jeyanathan et al.   FEMS MICROBIOLOGY ECOLOGY

Diversity of bovine rumen methanogens In vitro in the presence of condensed tannins, as determined by sequence analysis of 16S rRNA gene library

(2011) Hui Yin Tan et al.   JOURNAL OF MICROBIOLOGY

Methane emissions from yak (Bos grunniens) steers grazing or kept indoors and fed diets with varying forage:concentrate ratio during the cold season on the Qinghai-Tibetan Plateau

(2010) X.Z. Ding et al.   ANIMAL FEED SCIENCE AND TECHNOLOGY

Characterization of Variation in Rumen Methanogenic Communities under Different Dietary and Host Feed Efficiency Conditions, as Determined by PCR-Denaturing Gradient Gel Electrophoresis Analysis

(2010) M. Zhou et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

A flexible R package for nonnegative matrix factorization

(2010) Renaud Gaujoux et al.   BMC BIOINFORMATICS

Novel primers for 16S rRNA-based archaeal community analyses in environmental samples

(2010) Stephan Gantner et al.   JOURNAL OF MICROBIOLOGICAL METHODS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Metabolic, Phylogenetic, and Ecological Diversity of the Methanogenic Archaea

(2008) Yuchen Liu et al.   Annals of the New York Academy of Sciences

Structure of the Archaeal Community of the Rumen

(2008) P. H. Janssen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Enteric fermentation and ruminant eructation: the role (and control?) of methane in the climate change debate

(2008) Andy Thorpe   CLIMATIC CHANGE

China: The third pole

(2008) Jane Qiu   NATURE